RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C YLL067W-AP0CY01 160 aa1.8□□□□□ -2.12
CLN3YAL040C RPB3P16370 318 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C YCR043CP25361 127 aa1.8□□□□□ -2.12
CLN3YAL040C VMA11P32842 164 aa1.8□□□□□ -2.12
CLN3YAL040C APS1P35181 156 aa1.8□□□□□ -2.12
CLN3YAL040C ATG8P38182 117 aaRIP-Chip data1.8□□□□□ -2.12not detected
CLN3YAL040C GPI18P38211 433 aa1.8□□□□□ -2.12
CLN3YAL040C TRS20P38334 175 aa1.8□□□□□ -2.12
CLN3YAL040C YBR292CP38357 123 aa1.8□□□□□ -2.12
CLN3YAL040C PEX22P39718 180 aa1.8□□□□□ -2.12
CLN3YAL040C NSA2P40078 261 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C HUA1P40325 198 aa1.8□□□□□ -2.12
CLN3YAL040C YIR020CP40575 100 aa1.8□□□□□ -2.12
CLN3YAL040C DAN1P47178 298 aa1.8□□□□□ -2.12
CLN3YAL040C DSK2P48510 373 aa1.8□□□□□ -2.12
CLN3YAL040C SBH2P52871 88 aa1.8□□□□□ -2.12
CLN3YAL040C SCW10Q04951 389 aa1.8□□□□□ -2.12
CLN3YAL040C PRP11Q07350 266 aaPredicted RBP1.8□□□□□ -2.12
CLN3YAL040C AYT1Q12226 474 aa1.8□□□□□ -2.12
CLN3YAL040C YPS3Q12303 508 aa1.8□□□□□ -2.12
CLN3YAL040C JID1Q12350 301 aa1.8□□□□□ -2.12
CLN3YAL040C YDL085C-AQ3E7B7 68 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C YPL229WQ99395 206 aa1.8□□□□□ -2.12
CLN3YAL040C RPL15AP05748 204 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C PAU1P0CE88 120 aa1.8□□□□□ -2.12
CLN3YAL040C PAU14P0CE89 120 aa1.8□□□□□ -2.12
CLN3YAL040C PAU6P0CE90 120 aa1.8□□□□□ -2.12
CLN3YAL040C PAU18P0CE91 120 aa1.8□□□□□ -2.12
CLN3YAL040C PAU8P0CE92 120 aa1.8□□□□□ -2.12
CLN3YAL040C PAU11P0CE93 120 aa1.8□□□□□ -2.12
CLN3YAL040C QCR9P22289 66 aa1.8□□□□□ -2.12
CLN3YAL040C SDH4P37298 181 aa1.8□□□□□ -2.12
CLN3YAL040C YBR090CP38253 122 aa1.8□□□□□ -2.12
CLN3YAL040C YPT31P38555 223 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C PAU13P38725 120 aa1.8□□□□□ -2.12
CLN3YAL040C YAR068WP39564 161 aa1.8□□□□□ -2.12
CLN3YAL040C OXA1P39952 402 aa1.8□□□□□ -2.12
CLN3YAL040C YER076CP40049 302 aa1.8□□□□□ -2.12
CLN3YAL040C LSM4P40070 187 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C PEX17P40155 199 aa1.8□□□□□ -2.12
CLN3YAL040C YIL163CP40448 117 aa1.8□□□□□ -2.12
CLN3YAL040C RPR2P40571 144 aa1.8□□□□□ -2.12
CLN3YAL040C LST8P41318 303 aa1.8□□□□□ -2.12
CLN3YAL040C HAC1P41546 238 aa1.8□□□□□ -2.12
CLN3YAL040C YGR018CP53211 109 aa1.8□□□□□ -2.12
CLN3YAL040C PAU10Q03050 120 aa1.8□□□□□ -2.12
CLN3YAL040C SHH3Q04487 196 aa1.8□□□□□ -2.12
CLN3YAL040C YLR179CQ06252 201 aaKnown RBP1.8□□□□□ -2.12
CLN3YAL040C PAU20Q08322 120 aa1.8□□□□□ -2.12
CLN3YAL040C GEP5Q12393 293 aa1.8□□□□□ -2.12
CLN3YAL040C YGL258W-AQ3E740 77 aa1.8□□□□□ -2.12
CLN3YAL040C PAU9Q3E770 120 aa1.8□□□□□ -2.12
CLN3YAL040C UTP20P35194 2493 aaKnown RBP1.79□□□□□ -2.12
CLN3YAL040C TOM40P23644 387 aaKnown RBP1.79□□□□□ -2.12
CLN3YAL040C LSM2P38203 95 aaKnown RBP1.79□□□□□ -2.12
CLN3YAL040C YBR013CP38215 129 aa1.79□□□□□ -2.12
CLN3YAL040C BDH1P39714 382 aa1.79□□□□□ -2.12
CLN3YAL040C SNU13P39990 126 aaKnown RBP1.79□□□□□ -2.12
CLN3YAL040C PHS1P40857 217 aa1.79□□□□□ -2.12
CLN3YAL040C CIN5P40917 295 aa1.79□□□□□ -2.12
CLN3YAL040C SMD3P43321 101 aaKnown RBP1.79□□□□□ -2.12
CLN3YAL040C YJR085CP47131 105 aaKnown RBP1.79□□□□□ -2.12
CLN3YAL040C MIC27P50945 234 aa1.79□□□□□ -2.12
CLN3YAL040C BOR1P53838 576 aa1.79□□□□□ -2.12
CLN3YAL040C YNL184CP53876 108 aa1.79□□□□□ -2.12
CLN3YAL040C RAD28Q12021 506 aa1.79□□□□□ -2.12
CLN3YAL040C CDC7P06243 507 aa1.78□□□□□ -2.12
CLN3YAL040C RPS28BP0C0X0 67 aaKnown RBP1.78□□□□□ -2.12
CLN3YAL040C CPR1P14832 162 aaKnown RBP1.78□□□□□ -2.12
CLN3YAL040C BGL2P15703 313 aaKnown RBP1.78□□□□□ -2.12
CLN3YAL040C TCA17P32613 152 aa1.78□□□□□ -2.12
CLN3YAL040C YBL071CP38185 102 aa1.78□□□□□ -2.12
CLN3YAL040C GLE2P40066 365 aa1.78□□□□□ -2.12
CLN3YAL040C PGD1P40356 397 aa1.78□□□□□ -2.12
CLN3YAL040C YGR025WP53216 100 aa1.78□□□□□ -2.12
CLN3YAL040C TOM7P53507 60 aa1.78□□□□□ -2.12
CLN3YAL040C HHO1P53551 258 aa1.78□□□□□ -2.12
CLN3YAL040C RAV2Q03956 351 aa1.78□□□□□ -2.12
CLN3YAL040C RPS28AQ3E7X9 67 aaPredicted RBP1.78□□□□□ -2.12
CLN3YAL040C IGO2Q9P305 131 aa1.78□□□□□ -2.12
CLN3YAL040C ADH3P07246 375 aaKnown RBP1.77□□□□□ -2.13
CLN3YAL040C CUP2P15315 225 aa1.77□□□□□ -2.13
CLN3YAL040C PRY2P36110 329 aa1.77□□□□□ -2.13
CLN3YAL040C CSH1P38287 376 aa1.77□□□□□ -2.13
CLN3YAL040C DOG2P38773 246 aa1.77□□□□□ -2.13
CLN3YAL040C DOG1P38774 246 aa1.77□□□□□ -2.13
CLN3YAL040C PAU15P40585 124 aa1.77□□□□□ -2.13
CLN3YAL040C YJL027CP47063 138 aaPredicted RBP1.77□□□□□ -2.13
CLN3YAL040C SEN15Q04675 128 aa1.77□□□□□ -2.13
CLN3YAL040C YMR317WQ04893 1140 aa1.77□□□□□ -2.13
CLN3YAL040C NAT3Q06504 195 aa1.77□□□□□ -2.13
CLN3YAL040C YPL257WQ08974 193 aa1.77□□□□□ -2.13
CLN3YAL040C YHR213WP0CI67 198 aa1.77□□□□□ -2.13
CLN3YAL040C YGL010WP25338 174 aa1.77□□□□□ -2.13
CLN3YAL040C MRPL38P35996 138 aaPredicted RBP1.77□□□□□ -2.13
CLN3YAL040C MRPS9P38120 278 aa1.77□□□□□ -2.13
CLN3YAL040C YMR141CP40211 102 aa1.77□□□□□ -2.13
CLN3YAL040C GTT1P40582 234 aa1.77□□□□□ -2.13
CLN3YAL040C YFL067WP43537 175 aa1.77□□□□□ -2.13
CLN3YAL040C IMP2P46972 177 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms