RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CDR1P51861 262 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 NLRP12P59046 1061 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 ADCY1Q08828 1119 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 CETN1Q12798 172 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 PLD1Q13393 1074 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 COL19A1Q14993 1142 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 VEPH1Q14D04 833 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 STX1AQ16623 288 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SGSM1Q2NKQ1 1148 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 DPCR1Q3MIW9 517 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 MGAT5BQ3V5L5 792 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SLC39A12Q504Y0 691 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 INTS6LQ5JSJ4 861 aaKnown RBP7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 TPGS2Q68CL5 300 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 KRT39Q6A163 491 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 IQCEQ6IPM2 695 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SLC8B1Q6J4K2 584 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 TTI2Q6NXR4 508 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 Q6ZVU0 165 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SPATA2LQ8IUW3 424 aaPredicted RBP7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 PDCL2Q8N4E4 241 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 ZNF461Q8TAF7 563 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 PLEKHO2Q8TD55 490 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 HDAC7Q8WUI4 952 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 MSLNLQ96KJ4 702 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 RPGRIP1Q96KN7 1286 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 NECTIN4Q96NY8 510 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SEPT5Q99719 369 aaPredicted RBP7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SRRTQ9BXP5 876 aaKnown RBP7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 ADAM7Q9H2U9 754 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 TMEM8AQ9HCN3 771 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 ANO10Q9NW15 660 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 ZDHHC7Q9NXF8 308 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 GDAP2Q9NXN4 497 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 FBXW11Q9UKB1 542 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 L1RE1Q9UN81 338 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 SCN1AP35498 2009 aa7.73□□□□□ -1.17
NPLOC4-221ENST00000625705 A8MXQ7 604 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 CST3P01034 146 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 C4BPAP04003 597 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 PDGFRBP09619 1106 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 HNRNPA1P09651 372 aaKnown RBP eCLIP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 VSIG8P0DPA2 414 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 ATF2P15336 505 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 GBP2P32456 591 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 GTF2H1P32780 548 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 EPHB3P54753 998 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 RAB15P59190 212 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 PSMC1P62191 440 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 NOP14P78316 857 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 CYP27A1Q02318 531 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 ENPEPQ07075 957 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 PPP3CAQ08209 521 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 DHX9Q08211 1270 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 KCNC3Q14003 757 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 MAPRE1Q15691 268 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 NFE2Q16621 373 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 ZACNQ401N2 412 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 SYCE2Q6PIF2 218 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 RSPO2Q6UXX9 243 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 C15orf39Q6ZRI6 1047 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 GET4Q7L5D6 327 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 DPH6Q7L8W6 267 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 FRMD5Q7Z6J6 570 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 FILIP1Q7Z7B0 1213 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 TDRD5Q8NAT2 981 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 FBXL13Q8NEE6 735 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 SPATA18Q8TC71 538 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 TMEM174Q8WUU8 243 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 TAF4BQ92750 862 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 CNOT6LQ96LI5 555 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 UHRF1Q96T88 793 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 SYT15Q9BQS2 421 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 PI4K2AQ9BTU6 479 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 NAT10Q9H0A0 1025 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 AFF4Q9UHB7 1163 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 NR2E1Q9Y466 385 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 GPSM3Q9Y4H4 160 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 PCDHB5Q9Y5E4 795 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 INSL5Q9Y5Q6 135 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 ATP8B3O60423 1300 aa7.72□□□□□ -1.17
NPLOC4-221ENST00000625705 MTMR11A4FU01 709 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 C1RP00736 705 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 MYL4P12829 197 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 CD58P19256 250 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 WARSP23381 471 aaKnown RBP7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 ERCC5P28715 1186 aaPredicted RBP7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 HOXA9P31269 272 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 GNL1P36915 607 aaPredicted RBP7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 RAP1GAPP47736 663 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 YWHAEP62258 255 aaKnown RBP7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 CLDN10P78369 228 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 TWF1Q12792 350 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 SMARCB1Q12824 385 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 DUSP4Q13115 394 aa7.71□□□□□ -1.18
NPLOC4-221ENST00000625705 GPR17Q13304 367 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms