RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	ZNF845	Q96IR2	970 aa	Predicted RBP	10.12	□□□□□ -0.79
LRTOMT-222	ENST00000615940	METTL2A	Q96IZ6	378 aa	Known RBP	10.12	□□□□□ -0.79
LRTOMT-222	ENST00000615940	NSMCE3	Q96MG7	304 aa		10.12	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.12	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PDE11A	Q9HCR9	933 aa		10.12	□□□□□ -0.79
LRTOMT-222	ENST00000615940	NOX1	Q9Y5S8	564 aa		10.12	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CCDC85C	A6NKD9	419 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM196B	A6NMK8	535 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GSG1L2	A8MUP6	293 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PDPK1	O15530	556 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ST18	O60284	1047 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TSPAN3	O60637	253 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CHRNA1	P02708	482 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PDHB	P11177	359 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GDI1	P31150	447 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SOX5	P35711	763 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	LONP1	P36776	959 aa	Known RBP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	LIFR	P42702	1097 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	GSK3A	P49840	483 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FXR1	P51114	621 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PPP2R2A	P63151	447 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	APOBR	Q0VD83	1088 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MAP3K11	Q16584	847 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	LEXM	Q3ZCV2	418 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FKBP1C	Q5VVH2	108 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	AAGAB	Q6PD74	315 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FOXR1	Q6PIV2	292 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MOB2	Q70IA6	237 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ZNF365	Q70YC5	407 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM151A	Q8WW52	585 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	HDAC2	Q92769	488 aa	Known RBP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TMA16	Q96EY4	203 aa	Known RBP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ANKRD36BP1	Q96IX9	119 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ANKRD27	Q96NW4	1050 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PPP1R10	Q96QC0	940 aa	Known RBP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SELENOS	Q9BQE4	189 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ACPT	Q9BZG2	426 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ZCWPW1	Q9H0M4	648 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ALG2	Q9H553	416 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PFDN4	Q9NQP4	134 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	HSPBP1	Q9NZL4	362 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SOX13	Q9UN79	622 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	NOVA2	Q9UNW9	492 aa	Known RBP	10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MAPRE3	Q9UPY8	281 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	AP1M2	Q9Y6Q5	423 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PASK	Q96RG2	1323 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MYH4	Q9Y623	1939 aa		10.11	□□□□□ -0.79
LRTOMT-222	ENST00000615940	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SH3D21	A4FU49	640 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	AP3D1	O14617	1153 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM13A	O94988	1023 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CELF2	O95319	508 aa	Known RBP	10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CLTA	P09496	248 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	WEE2	P0C1S8	567 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CYP2D6	P10635	497 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CHRNB1	P11230	501 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ATF6	P18850	670 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CNGA2	Q16280	664 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	LRIT3	Q3SXY7	679 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SHE	Q5VZ18	495 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CST9	Q5W186	159 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM171B	Q6P995	826 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SHQ1	Q6PI26	577 aa	Known RBP	10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CLEC2A	Q6UVW9	174 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MIGA2	Q7L4E1	593 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	KIRREL3	Q8IZU9	778 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ANKRD35	Q8N283	1001 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TUBGCP3	Q96CW5	907 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TRAPPC9	Q96Q05	1148 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SMAD5	Q99717	465 aa	Known RBP	10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	BCL7B	Q9BQE9	202 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DDX23	Q9BUQ8	820 aa	Known RBP	10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	RHOBTB2	Q9BYZ6	727 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SNX25	Q9H3E2	840 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	XKR8	Q9H6D3	395 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ATP13A3	Q9H7F0	1226 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TM9SF3	Q9HD45	589 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TMEM260	Q9NX78	707 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM50B	Q9Y247	325 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PCDHGA2	Q9Y5H1	932 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM169A	Q9Y6X4	670 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PHIP	Q8WWQ0	1821 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	DOCK1	Q14185	1865 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PTPRF	P10586	1907 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	PNMA6F	A0A0J9YX94	578 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	WDR91	A4D1P6	747 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	FAM47E-STBD1	D6RA91	191 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	HIP1	O00291	1037 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MAGEB3	O15480	346 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	TXNL1	O43396	289 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	SORBS3	O60504	671 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ENTPD3	O75355	529 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	MAF	O75444	373 aa	Predicted RBP	10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	RASSF9	O75901	435 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	CCDC192	P0DO97	292 aa		10.1	□□□□□ -0.79
LRTOMT-222	ENST00000615940	ARHGAP25	P42331	645 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms