RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 FGFBP2Q9BYJ0 223 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PANK2Q9BZ23 570 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 EBF3Q9H4W6 596 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PDE11AQ9HCR9 933 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GTF3C4Q9UKN8 822 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CCL26Q9Y258 94 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DMXL1Q9Y485 3027 aa9.34□□□□□ -0.91
CDK5RAP3-229ENST00000583697 UBE4BO95155 1302 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TRAV19A0A0A6YYK7 116 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ZNF233A6NK53 670 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SOBPA7XYQ1 873 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 K7ESF4 209 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EIF3DO15371 548 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ATG13O75143 517 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PPP6R2O75170 966 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TADA3O75528 432 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 NOL4O94818 638 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 F11P03951 625 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 RETP07949 1114 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 USP17L7P0C7H9 530 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CYP2F1P24903 491 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ANXA13P27216 316 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PDE6CP51160 858 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PSMC1P62191 440 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 NUCB2P80303 420 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FAM160A1Q05DH4 1040 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DMWDQ09019 674 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ZNF268Q14587 947 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PDGFRLQ15198 375 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MAPRE1Q15691 268 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SDHAF4Q5VUM1 108 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TXNDC8Q6A555 127 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TRIM68Q6AZZ1 485 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DPH6Q7L8W6 267 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 WDR49Q8IV35 697 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ZSWIM2Q8NEG5 633 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 USP13Q92995 863 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MYLPFQ96A32 169 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DHX58Q96C10 678 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FAM84AQ96KN4 292 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FNBP1Q96RU3 617 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MMS19Q96T76 1030 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SYT15Q9BQS2 421 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 RTKNQ9BST9 563 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 KIAA1586Q9HCI6 787 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 HPS4Q9NQG7 708 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 GKN1Q9NS71 199 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 INTS13Q9NVM9 706 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 GDAP2Q9NXN4 497 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 HSPBP1Q9NZL4 362 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EHD2Q9NZN4 543 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PTPRDP23468 1912 aa9.33□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PTPRJQ12913 1337 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CACNA1IQ9P0X4 2223 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SPTLC2O15270 562 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FOXD2O60548 495 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 LRP3O75074 770 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 YEATS4O95619 227 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CCDC192P0DO97 292 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DLATP10515 647 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TNNI1P19237 187 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DRD1P21728 446 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TNNC1P63316 161 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CYP27A1Q02318 531 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 USP4Q13107 963 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SRSF5Q13243 272 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CCDC142Q17RM4 750 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DUOXA2Q1HG44 320 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TMEM196Q5HYL7 178 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FAM26FQ5R3K3 315 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 VSTM1Q6UX27 236 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PRR23CQ6ZRP0 262 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 HS2ST1Q7LGA3 356 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MON1AQ86VX9 555 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 WDR5BQ86VZ2 330 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 OSTM1Q86WC4 334 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CBWD2Q8IUF1 395 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 LINC00301Q8NCQ3 95 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 NETO1Q8TDF5 533 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ATP2A3Q93084 1043 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 HPS3Q969F9 1004 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 HPDLQ96IR7 371 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FAM83CQ9BQN1 747 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TRIM9Q9C026 710 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MAGEF1Q9HAY2 307 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PARD6AQ9NPB6 346 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SEMA4GQ9NTN9 838 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DUS2Q9NX74 493 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MAGEC2Q9UBF1 373 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SIX4Q9UIU6 781 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CDH9Q9ULB4 789 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-229ENST00000583697 GREB1Q4ZG55 1949 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms