RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MAP3K5Q99683 1374 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 PHRF1Q9P1Y6 1649 aaKnown RBP5.41□□□□□ -1.54
ATXN3-246ENST00000557030 NCAPD2Q15021 1401 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 CCDC154A6NI56 674 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 SNUPNO95149 360 aaKnown RBP5.41□□□□□ -1.54
ATXN3-246ENST00000557030 GCP02774 474 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 CFIP05156 583 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 ATP5JP18859 108 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 HSPA4P34932 840 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 ADRA1BP35368 520 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 INHBEP58166 350 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 TAP1Q03518 808 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 SCAPQ12770 1279 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 PTPAQ15257 358 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
ATXN3-246ENST00000557030 C3orf36Q3SXR2 165 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 HSP90AB4PQ58FF6 505 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
ATXN3-246ENST00000557030 CCDC30Q5VVM6 783 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 DRC7Q8IY82 874 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 RUFY2Q8WXA3 655 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 KAT5Q92993 513 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 CYFIP2Q96F07 1278 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 LTV1Q96GA3 475 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-246ENST00000557030 SLC13A1Q9BZW2 595 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 SERHL2Q9H4I8 314 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 TDP1Q9NUW8 608 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 C11orf21Q9P2W6 132 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 LIMCH1Q9UPQ0 1083 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 KIF3AQ9Y496 699 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 SLIT3O75094 1523 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 TMEM94Q12767 1356 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 CEMIPQ8WUJ3 1361 aa5.41□□□□□ -1.54
ATXN3-246ENST00000557030 RPAP1Q9BWH6 1393 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-246ENST00000557030 FAM208AQ9UK61 1670 aaKnown RBP5.4□□□□□ -1.54
ATXN3-246ENST00000557030 LTN1O94822 1766 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 OVOL3O00110 214 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 HTRA2O43464 458 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-246ENST00000557030 ADCY5O95622 1261 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 CCDC192P0DO97 292 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 DDCP20711 480 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 EDNRBP24530 442 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 NEK2P51955 445 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 KRT85P78386 507 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 MCL1Q07820 350 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 DMTNQ08495 405 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 MTM1Q13496 603 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 SYCP1Q15431 976 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 TAF7Q15545 349 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-246ENST00000557030 ZNF529Q6P280 563 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 Q6YL49 198 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 MED25Q71SY5 747 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 UBE3BQ7Z3V4 1068 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 RSPH3Q86UC2 560 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 CNTROBQ8N137 903 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 MIER2Q8N344 545 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 COA7Q96BR5 231 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 TOR3AQ9H497 397 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 AASDHPPTQ9NRN7 309 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 PACSIN3Q9UKS6 424 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 SMC3Q9UQE7 1217 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 LUC7L2Q9Y383 392 aaKnown RBP5.4□□□□□ -1.54
ATXN3-246ENST00000557030 USP15Q9Y4E8 981 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-246ENST00000557030 SPEF1Q9Y4P9 236 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 FPGT-TNNI3KV9GXZ4 949 aa5.4□□□□□ -1.54
ATXN3-246ENST00000557030 CCDC171Q6TFL3 1326 aa5.4□□□□□ -1.55
ATXN3-246ENST00000557030 RAD50Q92878 1312 aa5.4□□□□□ -1.55
ATXN3-246ENST00000557030 ROBO1Q9Y6N7 1651 aa5.4□□□□□ -1.55
ATXN3-246ENST00000557030 TRPM3Q9HCF6 1732 aaPredicted RBP5.4□□□□□ -1.55
ATXN3-246ENST00000557030 RGPD2P0DJD1 1756 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 STX6O43752 255 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 B3GALT2O43825 422 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 PRSS23O95084 383 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 ZRANB2O95218 330 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-246ENST00000557030 KIF20AO95235 890 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 NDUFA10O95299 355 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 CAVIN2O95810 425 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 PDCP20941 246 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 TGM1P22735 817 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 GCSHP23434 173 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 RECQLP46063 649 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-246ENST00000557030 EPHB1P54762 984 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 TARDBPQ13148 414 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-246ENST00000557030 UBXN2BQ14CS0 331 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 B3GNTL1Q67FW5 361 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-246ENST00000557030 SLC4A10Q6U841 1118 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 ARHGEF25Q86VW2 580 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 PDCL2Q8N4E4 241 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 CPEB3Q8NE35 698 aaKnown RBP5.39□□□□□ -1.55
ATXN3-246ENST00000557030 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 LRRC59Q96AG4 307 aaKnown RBP5.39□□□□□ -1.55
ATXN3-246ENST00000557030 CHMP4CQ96CF2 233 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 KIF1BPQ96EK5 621 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 WDR11Q9BZH6 1224 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 FBXO34Q9NWN3 711 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 PRDM4Q9UKN5 801 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms