RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 VWA3BQ502W6 1294 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 APTXQ7Z2E3 356 aaKnown RBP19.38■□□□□ 0.69
VEGFA-222ENST00000520948 GRASPQ7Z6J2 395 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-222ENST00000520948 THEM5Q8N1Q8 247 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 OR10T2Q8NGX3 314 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 ZNF461Q8TAF7 563 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 TMEM209Q96SK2 561 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 ACBD6Q9BR61 282 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 IMPG2Q9BZV3 1241 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 ZCWPW1Q9H0M4 648 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 NDST4Q9H3R1 872 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.38■□□□□ 0.694e-7■■■■■ 28.5
VEGFA-222ENST00000520948 LIMA1Q9UHB6 759 aaKnown RBP19.38■□□□□ 0.69
VEGFA-222ENST00000520948 FBXW11Q9UKB1 542 aa19.38■□□□□ 0.69
VEGFA-222ENST00000520948 WDR27A2RRH5 827 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 GTPBP10A4D1E9 387 aaKnown RBP19.37■□□□□ 0.69
VEGFA-222ENST00000520948 DCNP07585 359 aaKnown RBP19.37■□□□□ 0.69
VEGFA-222ENST00000520948 FSHRP23945 695 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 LMO2P25791 158 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 GPR17Q13304 367 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 KRT31Q15323 416 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 WDR44Q5JSH3 913 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 TPGS2Q68CL5 300 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 LRRTM3Q86VH5 581 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 NXPE3Q969Y0 559 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 PKMYT1Q99640 499 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 SMYD3Q9H7B4 428 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 ARHGEF3Q9NR81 526 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 DDX43Q9NXZ2 648 aaKnown RBP19.37■□□□□ 0.69
VEGFA-222ENST00000520948 FAM186AA6NE01 2351 aa19.37■□□□□ 0.69
VEGFA-222ENST00000520948 ANHXE9PGG2 379 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 HCRTO43612 131 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 VNN2O95498 520 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 OR4Q2P0C623 313 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 P4HA1P13674 534 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 PRKCSHP14314 528 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-222ENST00000520948 ATF2P15336 505 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 GNL1P36915 607 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-222ENST00000520948 CETN1Q12798 172 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 LIN9Q5TKA1 542 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 DPY19L2P1Q6NXN4 242 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 CCDC150Q8NCX0 1101 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 RPP25Q9BUL9 199 aaKnown RBP19.36■□□□□ 0.69
VEGFA-222ENST00000520948 NIF3L1Q9GZT8 377 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 CYP3A43Q9HB55 503 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.36■□□□□ 0.691e-6■■■□□ 15.3
VEGFA-222ENST00000520948 R4GN57 208 aa19.36■□□□□ 0.69
VEGFA-222ENST00000520948 RIF1Q5UIP0 2472 aaKnown RBP19.36■□□□□ 0.69
VEGFA-222ENST00000520948 CCL16O15467 120 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 C8AP07357 584 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 ATP1A3P13637 1013 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 KCNMA1Q12791 1236 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 PPM1LQ5SGD2 360 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 FAM171BQ6P995 826 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 PARM1Q6UWI2 310 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 RNF19BQ6ZMZ0 732 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 LUZP1Q86V48 1076 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 FAM200AQ8TCP9 573 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 FGF14Q92915 247 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 FOXQ1Q9C009 403 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 FAM124BQ9H5Z6 455 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-222ENST00000520948 TAB2Q9NYJ8 693 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 MAFFQ9ULX9 164 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 SPTBN4Q9H254 2564 aa19.35■□□□□ 0.69
VEGFA-222ENST00000520948 MIA3Q5JRA6 1907 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 SLC9A1P19634 815 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 PCSK1P29120 753 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 RAP1GAPP47736 663 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 COPB1P53618 953 aaKnown RBP19.34■□□□□ 0.69
VEGFA-222ENST00000520948 ARPP19P56211 112 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 INCA1Q0VD86 236 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 INTS6LQ5JSJ4 861 aaKnown RBP19.34■□□□□ 0.69
VEGFA-222ENST00000520948 PHLDB3Q6NSJ2 640 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 GBP6Q6ZN66 633 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 TCEAL8Q8IYN2 117 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 UBR7Q8N806 425 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 OR6B3Q8NGW1 331 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 WHAMMQ8TF30 809 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 INTS2Q9H0H0 1204 aaKnown RBP19.34■□□□□ 0.69
VEGFA-222ENST00000520948 VPS16Q9H269 839 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 SNX25Q9H3E2 840 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 TSPY26PQ9H489 355 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 TMLHEQ9NVH6 421 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 AFF4Q9UHB7 1163 aaKnown RBP19.34■□□□□ 0.69
VEGFA-222ENST00000520948 CDH9Q9ULB4 789 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 CDH7Q9ULB5 785 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 SIT1Q9Y3P8 196 aa19.34■□□□□ 0.69
VEGFA-222ENST00000520948 BECN2A8MW95 431 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 ATP2C2O75185 946 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 SEC24AO95486 1093 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 PDGFRBP09619 1106 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 CPB1P15086 417 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 CDK11BP21127 795 aaKnown RBP19.33■□□□□ 0.68
VEGFA-222ENST00000520948 ACAT1P24752 427 aaKnown RBP19.33■□□□□ 0.68
VEGFA-222ENST00000520948 PON1P27169 355 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 SMARCB1Q12824 385 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 UVSSAQ2YD98 709 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 TRIM65Q6PJ69 517 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 SCARA5Q6ZMJ2 495 aa19.33■□□□□ 0.68
VEGFA-222ENST00000520948 RTL10Q7L3V2 364 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms