RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 DNMT3BQ9UBC3 853 aaKnown RBP7.9□□□□□ -1.14
BRCA1-214ENST00000477152 FAM8A1Q9UBU6 413 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 GMEB2Q9UKD1 530 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 CLDN3O15551 220 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 FOXD2O60548 495 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-214ENST00000477152 TOM1L1O75674 476 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 ABLIM3O94929 683 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 CPB1P15086 417 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 TKTP29401 623 aaKnown RBP7.9□□□□□ -1.15
BRCA1-214ENST00000477152 SOX18P35713 384 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 NPTX2P47972 431 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 ARPP19P56211 112 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 CSTF1Q05048 431 aaKnown RBP7.9□□□□□ -1.15
BRCA1-214ENST00000477152 ADCY1Q08828 1119 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 PTPAQ15257 358 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 NAB2Q15742 525 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 RILPL1Q5EBL4 403 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 XKR4Q5GH76 650 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 GLRA4Q5JXX5 417 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 EEF1DP3Q658K8 133 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 FOXR1Q6PIV2 292 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 ZPBP2Q6X784 338 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 TPRG1Q6ZUI0 275 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 HAUS6Q7Z4H7 955 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 CD302Q8IX05 232 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 CSGALNACT1Q8TDX6 532 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 NANOS1Q8WY41 292 aaKnown RBP7.9□□□□□ -1.15
BRCA1-214ENST00000477152 BSNDQ8WZ55 320 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 RNF34Q969K3 372 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 EXOC4Q96A65 974 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 MCRS1Q96EZ8 462 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 BICD1Q96G01 975 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 FRMD6Q96NE9 622 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 KXD1Q9BQD3 176 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 CORO1BQ9BR76 489 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 FOXQ1Q9C009 403 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 CDT1Q9H211 546 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 RASSF4Q9H2L5 321 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 LIN7BQ9HAP6 207 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 ABCB6Q9NP58 842 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 ASAH2Q9NR71 780 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.15
BRCA1-214ENST00000477152 DLGAP2Q9P1A6 1054 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 AFF4Q9UHB7 1163 aaKnown RBP7.9□□□□□ -1.15
BRCA1-214ENST00000477152 R4GN57 208 aa7.9□□□□□ -1.15
BRCA1-214ENST00000477152 HIP1RO75146 1068 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 LARGE1O95461 756 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 GUCY2CP25092 1073 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ALDH1A3P47895 512 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 EPHB3P54753 998 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 MLLT6P55198 1093 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-214ENST00000477152 OSTNP61366 133 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 NTHL1P78549 312 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ROR1Q01973 937 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 HYAL2Q12891 473 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 LRRC32Q14392 662 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 NOLC1Q14978 699 aaKnown RBP eCLIP7.89□□□□□ -1.15
BRCA1-214ENST00000477152 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ARHGAP15Q53QZ3 475 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ARMCX5Q6P1M9 558 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ALKAL1Q6UXT8 129 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 KIAA2013Q8IYS2 634 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 IGSF22Q8N9C0 903 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ITFG1Q8TB96 612 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 TRIM56Q9BRZ2 755 aaKnown RBP7.89□□□□□ -1.15
BRCA1-214ENST00000477152 NTPCRQ9BSD7 190 aaKnown RBP7.89□□□□□ -1.15
BRCA1-214ENST00000477152 TRPV5Q9NQA5 729 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ARHGAP28Q9P2N2 729 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ZMYM5Q9UJ78 669 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 UBQLN1Q9UMX0 589 aaKnown RBP7.89□□□□□ -1.15
BRCA1-214ENST00000477152 ASB3Q9Y575 518 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 INSL5Q9Y5Q6 135 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 PATJQ8NI35 1801 aa7.89□□□□□ -1.15
BRCA1-214ENST00000477152 PDCD11Q14690 1871 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 PTPRZ1P23471 2315 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 OR6C75A6NL08 312 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 H3BQV1 296 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ZNF263O14978 683 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 BMP15O95972 392 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CLTAP09496 248 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 HARSP12081 509 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 PLS3P13797 630 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 PSMC3P17980 439 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 MX2P20592 715 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CYP3A5P20815 502 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 U2AF2P26368 475 aaKnown RBP eCLIP7.88□□□□□ -1.151e-6■■■□□ 19.1
BRCA1-214ENST00000477152 BRCC3P46736 316 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CCR3P51677 355 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 LMNB2Q03252 620 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 YWHAHQ04917 246 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 RNFT1Q5M7Z0 435 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 DSTYKQ6XUX3 929 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ITIH5Q86UX2 942 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ING5Q8WYH8 240 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 SMARCD2Q92925 531 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CLDN23Q96B33 292 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CALML4Q96GE6 196 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms