RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 KANSL1LA0AUZ9 987 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 NT5C1B-RDH14C9J2C7 533 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ARP10275 920 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 GNSP15586 552 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 EPB42P16452 691 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 GCKP35557 465 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CASP2P42575 452 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 STX1BP61266 288 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 GHRHRQ02643 423 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 OTOP3Q7RTS5 596 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CPLX4Q7Z7G2 160 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 PDIK1LQ8N165 341 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 RBM41Q96IZ5 413 aaKnown RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 NIF3L1Q9GZT8 377 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 OLFML3Q9NRN5 406 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 HOMER3Q9NSC5 361 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 FANCLQ9NW38 375 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 BTBD7Q9P203 1132 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 TBX21Q9UL17 535 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ESPNB1AK53 854 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 WEE2P0C1S8 567 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CDK7P50613 346 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CDH6P55285 790 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 TRIM60Q495X7 471 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ANKS4BQ8N8V4 417 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 SYT15Q9BQS2 421 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 KLHL11Q9NVR0 708 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 NDOR1Q9UHB4 597 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ARHGAP10A1A4S6 786 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ADAMTS4O75173 837 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 PPFIA2O75334 1257 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 LGR5O75473 907 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 MYO1DO94832 1006 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 RTN3O95197 1032 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CSH1P0DML2 217 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CSH2P0DML3 217 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 KCNA5P22460 613 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 RPA1P27694 616 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CENPCQ03188 943 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 EHHADHQ08426 723 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 GIT2Q14161 759 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 LBRQ14739 615 aaKnown RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 TEAD4Q15561 434 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 BBS9Q3SYG4 887 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 TAF1BQ53T94 588 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CELF3Q5SZQ8 465 aaKnown RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 PDCL2Q8N4E4 241 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ATL2Q8NHH9 583 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 GLMNQ92990 594 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 HVCN1Q96D96 273 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 PORCNQ9H237 461 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 DDX43Q9NXZ2 648 aaKnown RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CYP39A1Q9NYL5 469 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 AIPL1Q9NZN9 384 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 CRLS1Q9UJA2 301 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 PKP3Q9Y446 797 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 SPACA6W5XKT8 324 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ZNF189O75820 626 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-206ENST00000428680 TJP3O95049 919 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 RHOAP61586 193 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 UBE3AQ05086 875 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 SNX1Q13596 522 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 INAVAQ3KP66 663 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 FBXL19Q6PCT2 694 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 TRIM67Q6ZTA4 783 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 KCTD17Q8N5Z5 321 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 LINC00301Q8NCQ3 95 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ERLEC1Q96DZ1 483 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 PDE11AQ9HCR9 933 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 GJB4Q9NTQ9 266 aa7.58□□□□□ -1.2
CNOT4-206ENST00000428680 ARHGAP42A6NI28 874 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 C3orf70A6NLC5 250 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 PDE2AO00408 941 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 MAPK13O15264 365 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 MSH4O15457 936 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 EXTL3O43909 919 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 C1RP00736 705 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 EPHB2P29323 1055 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 NOVP48745 357 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 IMPG1Q17R60 797 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 ALKBH5Q6P6C2 394 aaKnown RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 SLC24A5Q71RS6 500 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 SCLYQ96I15 445 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 UBXN6Q9BZV1 441 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 PP2D1A8MPX8 630 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 BUB1BO60566 1050 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 CDC25CP30307 473 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 SYCP2LQ5T4T6 812 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 RHOT2Q8IXI1 618 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 DBF4BQ8NFT6 615 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 NPLOC4Q8TAT6 608 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 FAF2Q96CS3 445 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 PAGE5Q96GU1 130 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 C6orf203Q9P0P8 240 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 ZNF214Q9UL59 606 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms