RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 DEPDC7Q96QD5 511 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ABI2Q9NYB9 513 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 SMG5Q9UPR3 1016 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 GMNCA6NCL1 334 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 NPTXRO95502 500 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 NCAM1P13591 858 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 MAPK1P28482 360 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 GPC1P35052 558 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CHI3L1P36222 383 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 HSPA9P38646 679 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 NFIAQ12857 509 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 STX3Q13277 289 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ZNF284Q2VY69 593 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 TXNRD3Q86VQ6 643 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ARRDC4Q8NCT1 418 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CHST12Q9NRB3 414 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 TRMT6Q9UJA5 497 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 EIF3LQ9Y262 564 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 SLC26A4O43511 780 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 JAK1P23458 1154 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CACHD1Q5VU97 1274 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 LUZP2Q86TE4 346 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 RBBP8NLQ8NC74 664 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 STAMBPL1Q96FJ0 436 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 KAZALD1Q96I82 304 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 MCEEQ96PE7 176 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CAMKK2Q96RR4 588 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 DDX47Q9H0S4 455 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 TRABDQ9H4I3 376 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 WDR41Q9HAD4 459 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 FOXN1O15353 648 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CAP2P40123 477 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CSE1LP55060 971 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 DCAF6Q58WW2 860 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 KIAA2013Q8IYS2 634 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 MRPS26Q9BYN8 205 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ETNK1Q9HBU6 452 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 PALMDQ9NP74 551 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 NMRK2Q9NPI5 230 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 PAK5Q9P286 719 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CNTNAP5Q8WYK1 1306 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 PSMD12O00232 456 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ANXA9O76027 345 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 GPD1P21695 349 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 NMT1P30419 496 aaKnown RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 PGM1P36871 562 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-208ENST00000428599 STARD3Q14849 445 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 ZNF614Q8N883 585 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 NLNQ9BYT8 704 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 LNPEPQ9UIQ6 1025 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 APPL1Q9UKG1 709 aa9.3□□□□□ -0.92
CTNND1-208ENST00000428599 PDHA1P08559 390 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 DEFA1P59665 94 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 DEFA3P59666 94 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CSTF3Q12996 717 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CYTH1Q15438 398 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CNGA3Q16281 694 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 SHROOM1Q2M3G4 852 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PREPLQ4J6C6 727 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PPCSQ9HAB8 311 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 FAM49BQ9NUQ9 324 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 THG1LQ9NWX6 298 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 SMAPO00193 183 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 NCK2O43639 380 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 SPAG6O75602 509 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 RPLP2P05387 115 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CLCN6P51797 869 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 RPS7P62081 194 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 DNAL1Q4LDG9 190 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 NFRKBQ6P4R8 1299 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CPA5Q8WXQ8 436 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PNKPQ96T60 521 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 OSBPL6Q9BZF3 934 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ASCC2Q9H1I8 757 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ENO1P06733 434 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ENO3P13929 434 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 RRM2P31350 389 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 EPHB3P54753 998 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 YWHAZP63104 245 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ZNF200P98182 395 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CXCL9Q07325 125 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PTPAQ15257 358 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 GSTA3Q16772 222 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ICE2Q659A1 982 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 HERC6Q8IVU3 1022 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CYFIP2Q96F07 1278 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 XPO6Q96QU8 1125 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 RSAD1Q9HA92 442 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms