RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 hCG_1818297A0A087WSY0 165 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 HAS3O00219 553 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TNPO2O14787 897 aaKnown RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 RIPK2O43353 540 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 ADCY8P40145 1251 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 CDKN2BP42772 138 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 SLC25A11Q02978 314 aaKnown RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TRIP13Q15645 432 aaPredicted RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TTC19Q6DKK2 380 aaPredicted RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 LCLAT1Q6UWP7 414 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 TRMT10CQ7L0Y3 403 aaKnown RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 ZMAT2Q96NC0 199 aaKnown RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 FAM118BQ9BPY3 351 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 CXCL16Q9H2A7 254 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 LRRC4CQ9HCJ2 640 aa21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 METTL5Q9NRN9 209 aaKnown RBP21.46■■□□□ 1.03
CHRNA3-202ENST00000348639 LIASO43766 372 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 LRCH4O75427 683 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 KRT7P08729 469 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 AXLP30530 894 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 PSEN2P49810 448 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ITGA8P53708 1063 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ZNF200P98182 395 aaPredicted RBP21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 CROCCP2Q86T23 111 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ARFGAP1Q8N6T3 406 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 BBOF1Q8ND07 529 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 AAASQ9NRG9 546 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 NOVA2Q9UNW9 492 aaKnown RBP21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 HES2Q9Y543 173 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 LRRD1A4D1F6 860 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 TREHO43280 583 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 HPDP32754 393 aaPredicted RBP21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ACAP1Q15027 740 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 STILQ15468 1287 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 HADHQ16836 314 aaKnown RBP21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ALKAL1Q6UXT8 129 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 TMEM109Q9BVC6 243 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ZFYVE28Q9HCC9 887 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 ANAPC5Q9UJX4 755 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 EFR3BQ9Y2G0 817 aa21.45■■□□□ 1.02
CHRNA3-202ENST00000348639 KLRC2P26717 231 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 MDH1P40925 334 aaKnown RBP21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 BYSLQ13895 437 aaKnown RBP21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 DPH6Q7L8W6 267 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 CCDC25Q86WR0 208 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 LRRC52Q8N7C0 313 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 BEST2Q8NFU1 509 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 UBA3Q8TBC4 463 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 IPO4Q8TEX9 1081 aaKnown RBP21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 TLCD1Q96CP7 247 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 APBA2Q99767 749 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 TRIM6Q9C030 488 aaPredicted RBP21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 CNTN3Q9P232 1028 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 DNPEPQ9ULA0 475 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 Q9Y3F1 56 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 DNAH12Q6ZR08 3092 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 RALGAPA2Q2PPJ7 1873 aa21.44■■□□□ 1.02
CHRNA3-202ENST00000348639 C3orf70A6NLC5 250 aaPredicted RBP21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 CYP3A5P20815 502 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 GUCY1A3Q02108 690 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 EMC1Q8N766 993 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 CCHCR1Q8TD31 782 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 ACSF2Q96CM8 615 aaPredicted RBP21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 PGM2Q96G03 612 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 MIS12Q9H081 205 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 TSPAN16Q9UKR8 245 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 DRG1Q9Y295 367 aaKnown RBP21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 CAND2O75155 1236 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 IL1R2P27930 398 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 MAGOHP61326 146 aaKnown RBP21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 CRHR2Q13324 411 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 GSTA5Q7RTV2 222 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 SOCS4Q8WXH5 440 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 APOL6Q9BWW8 343 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 NXF3Q9H4D5 531 aaKnown RBP21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 TUBGCP4Q9UGJ1 667 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 SNX9Q9Y5X1 595 aa21.43■■□□□ 1.02
CHRNA3-202ENST00000348639 PPEF2O14830 753 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 SLC10A3P09131 477 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 CHKAP35790 457 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 VPS41P49754 854 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 INHBEP58166 350 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 PPP2R2AP63151 447 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 SNX17Q15036 470 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 UBAP2Q5T6F2 1119 aaKnown RBP21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 FOXR1Q6PIV2 292 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 TMEM40Q8WWA1 233 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 CDC42EP4Q9H3Q1 356 aaKnown RBP21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 ZWILCHQ9H900 591 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 RNF19AQ9NV58 838 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 SLC12A6Q9UHW9 1150 aa21.42■■□□□ 1.02
CHRNA3-202ENST00000348639 RECQL4O94761 1208 aa21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 LSP1P33241 339 aa21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 FSCN1Q16658 493 aaKnown RBP21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 GLRA4Q5JXX5 417 aa21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 C6orf118Q5T5N4 469 aa21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 FAM102AQ5T9C2 384 aaPredicted RBP21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 BCAS4Q8TDM0 211 aa21.41■■□□□ 1.02
CHRNA3-202ENST00000348639 C18orf25Q96B23 403 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms