RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Zscan4cQ80VJ6 506 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Spata7Q80VP2 582 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Usp38Q8BW70 1042 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ccdc15Q8C9M2 810 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mettl16Q9CQG2 553 aaKnown RBP16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Dnajc7Q9QYI3 494 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm7694J3QNH8 270 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Kcnu1O54982 1121 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 PolgP54099 1218 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Trim43aQ3TL54 445 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mkrn3Q60764 544 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gpt2Q8BGT5 522 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gpc2Q8BKV1 579 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Aldh4a1Q8CHT0 562 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Plekha4Q8VC98 588 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Q9D937 123 aaKnown RBP16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cpb2Q9JHH6 422 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ccl26F8VQM2 93 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm3739L7N296 216 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tnfrsf11aO35305 625 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ctnnd1P30999 938 aaKnown RBP16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Slc12a2P55012 1205 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Echdc2Q3TLP5 296 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Chsy1Q6ZQ11 800 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pwp2Q8BU03 919 aaKnown RBP16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Q8CD60 292 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Lpin2Q99PI5 893 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 KynuQ9CXF0 464 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Scube2Q9JJS0 997 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm3164L7N2B9 238 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm3264L7N2C5 238 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ica1lQ3TY65 431 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm4981Q3ULJ8 291 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rasal3Q8C2K5 1041 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Abca3Q8R420 1704 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm281D3Z1Y0 860 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Slc2a4P14142 509 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 RpsaP14206 295 aaKnown RBP16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tespa1Q3U132 458 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 SkiQ60698 725 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ccdc154Q6RUT8 657 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Zfyve28Q6ZPK7 905 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mindy1Q76LS9 468 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Wfdc1Q9ESH5 211 aa16.06■□□□□ 0.16
Upf1-202ENSMUST00000215817 Krt10P02535 570 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Sstr3P30935 428 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Stmn4P63042 189 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pid1Q3UBG2 217 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Krt77Q6IFZ6 572 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ssxb10Q6XAR7 170 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Stk38lQ7TSE6 464 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Eif2aQ8BJW6 581 aaKnown RBP16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 NonoQ99K48 473 aaKnown RBP16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Plch1Q4KWH5 1682 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Soat2O88908 525 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Kif5cP28738 956 aaKnown RBP16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rnf40Q3U319 1001 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 FaxcQ3UMF9 409 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Wdr44Q6NVE8 915 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Trim62Q80V85 475 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Them6Q80ZW2 207 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Znf473Q8BI67 892 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ugp2Q91ZJ5 508 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 AdarQ99MU3 1178 aaKnown RBP16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Bzw1Q9CQC6 419 aaKnown RBP16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Micu3Q9CTY5 523 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Sppl3Q9CUS9 384 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 March8Q9DBD2 286 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Trim30bE9PVL6 203 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 EgfP01132 1217 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Chrna1P04756 457 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Slc16a1P53986 493 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Has1Q61647 583 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Hmgb4Q6P8W9 181 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 AmphQ7TQF7 686 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rab44Q8CB87 725 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Q8VDP2 222 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Themis3Q9CU24 569 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cul2Q9D4H8 745 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rpf2Q9JJ80 306 aaKnown RBP16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ecel1Q9JMI0 775 aa16.05■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cyth3O08967 399 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Snx12O70493 165 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cd72P21855 354 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ntan1Q64311 310 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 1700001K19RikQ80ZT1 219 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Spon2Q8BMS2 330 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pak4Q8BTW9 593 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ankrd54Q91WK7 299 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pcdhb19Q91Y01 801 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Q922M7 232 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Nme3Q9WV85 169 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Znf638Q61464 1960 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Akap1O08715 857 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Kifc3O35231 824 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mucl2P02815 138 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rpl10aP53026 217 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Serpina5P70458 405 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ifnl2Q4VK74 193 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Arl5cQ6P068 179 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms