RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Gm3182K7N6T8 263 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Slc30a9Q5IRJ6 567 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 PighQ5M9N4 188 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Papd5Q68ED3 633 aaKnown RBP11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Fnbp1Q80TY0 616 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 GnsQ8BFR4 544 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Creb3l2Q8BH52 521 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Tmem220Q8BP07 167 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Mcoln2Q8K595 566 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Plekhh3Q8VCE9 796 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Fam49bQ921M7 324 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 GOLGA7BQ9D428 167 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Wfdc1Q9ESH5 211 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Krt17Q9QWL7 433 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Tbkbp1A2A9T0 611 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Casp14O89094 257 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Sstr3P30935 428 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Nr2c2P49117 596 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Mxi1P50540 228 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Anks6Q6GQX6 883 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Kirrel3Q8BR86 778 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Slc9a4Q8BUE1 797 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Ttc39bQ8BYY4 617 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Calcoco1Q8CGU1 691 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 UvragQ8K245 698 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Btbd6Q8K2J9 488 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 BlmhQ8R016 455 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Oxct1Q9D0K2 520 aaKnown RBP11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Map2k5Q9WVS7 448 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Scgb2b12S4R2L0 112 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Fpr-rs4A4FUQ5 323 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Tspyl1O88852 379 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 AlbP07724 608 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 CcnoP0C242 352 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Gjb3P28231 270 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Ctnnd1P30999 938 aaKnown RBP11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Uimc1Q5U5Q9 727 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Znf235Q61116 645 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Acvrl1Q61288 502 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Sh3gl2Q62420 352 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Kbtbd3Q8BHI4 607 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Gprc5aQ8BHL4 356 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Dis3lQ8C0S1 1053 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Apol9bQ8C7I4 310 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Apol9aQ8VDU3 310 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 TraipQ8VIG6 470 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Prkag2Q91WG5 566 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Eif3hQ91WK2 352 aaKnown RBP11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Gdap2Q9DBL2 498 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Mgea5Q9EQQ9 916 aa11.36□□□□□ -0.59
Lig3-212ENSMUST00000173727 Pate3B3GLJ3 98 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Scgb2b7D3YYY1 112 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Cbfa2t2O70374 594 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Acvr2bP27040 536 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Zscan2Q07230 614 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Zfp658Q5PPQ4 887 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 CochQ62507 552 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Wdr44Q6NVE8 915 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Inppl1Q6P549 1257 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Wdr35Q8BND3 1181 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 MiosQ8VE19 875 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Actn2Q9JI91 894 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Entpd5Q9WUZ9 427 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Col5a3Q9JLI2 1739 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Mroh4G3X8W1 983 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Becn2P0DM65 447 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Aldh2P47738 519 aaKnown RBP11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Hsd17b1P51656 344 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 ShbQ6PD21 503 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Lrfn2Q80TG9 788 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 CyldQ80TQ2 952 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Rhot1Q8BG51 631 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Adgrg2Q8CJ12 1009 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Rpa3Q9CQ71 121 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 GarsQ9CZD3 729 aaKnown RBP11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Tlr6Q9EPW9 795 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 DpysQ9EQF5 519 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Cacng4Q9JJV4 327 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Ms4a14A0A087WSD2 1232 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 ZxdbA2CE44 873 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Gm281D3Z1Y0 860 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Olfr1354E9Q5G9 310 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Farp1F8VPU2 1048 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Slc6a20bO88575 635 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 P01650 108 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 P01653 108 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Sesn2P58043 480 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Ift20Q61025 132 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Nr2e1Q64104 385 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Lig4Q8BTF7 911 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Lgi2Q8K4Z0 550 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Themis2Q91YX0 663 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Alg1Q921Q3 482 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Clstn3Q99JH7 956 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Dpp3Q99KK7 738 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Xrn2Q9DBR1 951 aaKnown RBP11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Mrpl4Q9DCU6 294 aaKnown RBP11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 ParvaQ9EPC1 372 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 CtsfQ9R013 462 aa11.35□□□□□ -0.59
Lig3-212ENSMUST00000173727 Tnni1Q9WUZ5 187 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms