Protein–RNA interactions for Protein: Q5U5Q9

Uimc1, BRCA1-A complex subunit RAP80, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uimc1Q5U5Q9 Gm25239-201ENSMUST00000174915 86 ntBASIC42.23■■■■■ 4.35
Uimc1Q5U5Q9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Uimc1Q5U5Q9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
Uimc1Q5U5Q9 Gm15042-201ENSMUST00000120212 883 ntBASIC36.75■■■■□ 3.47
Uimc1Q5U5Q9 Gm24109-201ENSMUST00000175489 103 ntBASIC36.68■■■■□ 3.46
Uimc1Q5U5Q9 Gm15045-201ENSMUST00000117359 883 ntBASIC35.95■■■■□ 3.35
Uimc1Q5U5Q9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Uimc1Q5U5Q9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
Uimc1Q5U5Q9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Uimc1Q5U5Q9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Uimc1Q5U5Q9 Gm23366-201ENSMUST00000175022 89 ntBASIC35.21■■■■□ 3.23
Uimc1Q5U5Q9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Uimc1Q5U5Q9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Uimc1Q5U5Q9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
Uimc1Q5U5Q9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Uimc1Q5U5Q9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.26■■■■□ 3.08
Uimc1Q5U5Q9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.03■■■■□ 3.04
Uimc1Q5U5Q9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.93■■■■□ 3.02
Uimc1Q5U5Q9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.88■■■■□ 3.01
Uimc1Q5U5Q9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Uimc1Q5U5Q9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Uimc1Q5U5Q9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Uimc1Q5U5Q9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.7■■■□□ 2.98
Uimc1Q5U5Q9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Uimc1Q5U5Q9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Uimc1Q5U5Q9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Uimc1Q5U5Q9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Uimc1Q5U5Q9 Gm25238-201ENSMUST00000174914 89 ntBASIC33.4■■■□□ 2.94
Uimc1Q5U5Q9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Uimc1Q5U5Q9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.31■■■□□ 2.92
Uimc1Q5U5Q9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Uimc1Q5U5Q9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
Uimc1Q5U5Q9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.02■■■□□ 2.88
Uimc1Q5U5Q9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Uimc1Q5U5Q9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Uimc1Q5U5Q9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
Uimc1Q5U5Q9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Uimc1Q5U5Q9 Psd-208ENSMUST00000224556 2034 ntBASIC32.59■■■□□ 2.81
Uimc1Q5U5Q9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Uimc1Q5U5Q9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.44■■■□□ 2.78
Uimc1Q5U5Q9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Uimc1Q5U5Q9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.33■■■□□ 2.77
Uimc1Q5U5Q9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
Uimc1Q5U5Q9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.25■■■□□ 2.75
Uimc1Q5U5Q9 Gm27325-201ENSMUST00000175467 74 ntBASIC32.18■■■□□ 2.74
Uimc1Q5U5Q9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Uimc1Q5U5Q9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Uimc1Q5U5Q9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.04■■■□□ 2.72
Uimc1Q5U5Q9 Gm25262-201ENSMUST00000174934 133 ntBASIC31.99■■■□□ 2.71
Uimc1Q5U5Q9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Uimc1Q5U5Q9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Uimc1Q5U5Q9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Uimc1Q5U5Q9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.7■■■□□ 2.67
Uimc1Q5U5Q9 Rab21-202ENSMUST00000218831 843 ntBASIC31.67■■■□□ 2.66
Uimc1Q5U5Q9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Uimc1Q5U5Q9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.63■■■□□ 2.65
Uimc1Q5U5Q9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.59■■■□□ 2.65
Uimc1Q5U5Q9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.59■■■□□ 2.65
Uimc1Q5U5Q9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Uimc1Q5U5Q9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.48■■■□□ 2.63
Uimc1Q5U5Q9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Uimc1Q5U5Q9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Uimc1Q5U5Q9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.42■■■□□ 2.62
Uimc1Q5U5Q9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Uimc1Q5U5Q9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.34■■■□□ 2.61
Uimc1Q5U5Q9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Uimc1Q5U5Q9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Uimc1Q5U5Q9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Uimc1Q5U5Q9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Uimc1Q5U5Q9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
Uimc1Q5U5Q9 Gm26115-201ENSMUST00000175605 87 ntBASIC31.25■■■□□ 2.59
Uimc1Q5U5Q9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.19■■■□□ 2.58
Uimc1Q5U5Q9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Uimc1Q5U5Q9 Gm8109-201ENSMUST00000194076 746 ntBASIC31.12■■■□□ 2.57
Uimc1Q5U5Q9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Uimc1Q5U5Q9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Uimc1Q5U5Q9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Uimc1Q5U5Q9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Uimc1Q5U5Q9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Uimc1Q5U5Q9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Uimc1Q5U5Q9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Uimc1Q5U5Q9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.97■■■□□ 2.55
Uimc1Q5U5Q9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Uimc1Q5U5Q9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Uimc1Q5U5Q9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.91■■■□□ 2.54
Uimc1Q5U5Q9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Uimc1Q5U5Q9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Uimc1Q5U5Q9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.83■■■□□ 2.53
Uimc1Q5U5Q9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Uimc1Q5U5Q9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Uimc1Q5U5Q9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Uimc1Q5U5Q9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Uimc1Q5U5Q9 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.67■■■□□ 2.5
Uimc1Q5U5Q9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Uimc1Q5U5Q9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.64■■■□□ 2.5
Uimc1Q5U5Q9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.62■■■□□ 2.49
Uimc1Q5U5Q9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Uimc1Q5U5Q9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Uimc1Q5U5Q9 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.58■■■□□ 2.49
Uimc1Q5U5Q9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms