Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm25239-201ENSMUST00000174915 86 ntBASIC41,49■■■■■ 4,23
TraipQ8VIG6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,29■■■■□ 3,72
TraipQ8VIG6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
TraipQ8VIG6 Gm15042-201ENSMUST00000120212 883 ntBASIC36,35■■■■□ 3,41
TraipQ8VIG6 Gm24109-201ENSMUST00000175489 103 ntBASIC35,93■■■■□ 3,34
TraipQ8VIG6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
TraipQ8VIG6 Gm15045-201ENSMUST00000117359 883 ntBASIC35,58■■■■□ 3,29
TraipQ8VIG6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,22■■■■□ 3,23
TraipQ8VIG6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35,17■■■■□ 3,22
TraipQ8VIG6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35,06■■■■□ 3,2
TraipQ8VIG6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,83■■■■□ 3,17
TraipQ8VIG6 Gm23366-201ENSMUST00000175022 89 ntBASIC34,71■■■■□ 3,15
TraipQ8VIG6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34,67■■■■□ 3,14
TraipQ8VIG6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,51■■■■□ 3,12
TraipQ8VIG6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,97■■■■□ 3,03
TraipQ8VIG6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
TraipQ8VIG6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,69■■■□□ 2,98
TraipQ8VIG6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,61■■■□□ 2,97
TraipQ8VIG6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,58■■■□□ 2,97
TraipQ8VIG6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,43■■■□□ 2,94
TraipQ8VIG6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,38■■■□□ 2,93
TraipQ8VIG6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,27■■■□□ 2,92
TraipQ8VIG6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,25■■■□□ 2,91
TraipQ8VIG6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,18■■■□□ 2,9
TraipQ8VIG6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33,13■■■□□ 2,89
TraipQ8VIG6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33,08■■■□□ 2,89
TraipQ8VIG6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33,07■■■□□ 2,89
TraipQ8VIG6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,04■■■□□ 2,88
TraipQ8VIG6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2,87
TraipQ8VIG6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
TraipQ8VIG6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,91■■■□□ 2,86
TraipQ8VIG6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
TraipQ8VIG6 Psd-208ENSMUST00000224556 2034 ntBASIC32,85■■■□□ 2,85
TraipQ8VIG6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,76■■■□□ 2,83
TraipQ8VIG6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,74■■■□□ 2,83
TraipQ8VIG6 Gm25238-201ENSMUST00000174914 89 ntBASIC32,72■■■□□ 2,83
TraipQ8VIG6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32,47■■■□□ 2,79
TraipQ8VIG6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,46■■■□□ 2,79
TraipQ8VIG6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,22■■■□□ 2,75
TraipQ8VIG6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,16■■■□□ 2,74
TraipQ8VIG6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
TraipQ8VIG6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32,03■■■□□ 2,72
TraipQ8VIG6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,02■■■□□ 2,72
TraipQ8VIG6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,97■■■□□ 2,71
TraipQ8VIG6 Gm27325-201ENSMUST00000175467 74 ntBASIC31,92■■■□□ 2,7
TraipQ8VIG6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,92■■■□□ 2,7
TraipQ8VIG6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,89■■■□□ 2,7
TraipQ8VIG6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,83■■■□□ 2,69
TraipQ8VIG6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,82■■■□□ 2,68
TraipQ8VIG6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,82■■■□□ 2,68
TraipQ8VIG6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,63■■■□□ 2,65
TraipQ8VIG6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
TraipQ8VIG6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,53■■■□□ 2,64
TraipQ8VIG6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,48■■■□□ 2,63
TraipQ8VIG6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,44■■■□□ 2,62
TraipQ8VIG6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
TraipQ8VIG6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
TraipQ8VIG6 Gm25262-201ENSMUST00000174934 133 ntBASIC31,33■■■□□ 2,61
TraipQ8VIG6 Rab21-202ENSMUST00000218831 843 ntBASIC31,29■■■□□ 2,6
TraipQ8VIG6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31,23■■■□□ 2,59
TraipQ8VIG6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
TraipQ8VIG6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
TraipQ8VIG6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31,21■■■□□ 2,59
TraipQ8VIG6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,17■■■□□ 2,58
TraipQ8VIG6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
TraipQ8VIG6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31,06■■■□□ 2,56
TraipQ8VIG6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
TraipQ8VIG6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
TraipQ8VIG6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31,02■■■□□ 2,56
TraipQ8VIG6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31,02■■■□□ 2,56
TraipQ8VIG6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31,02■■■□□ 2,56
TraipQ8VIG6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,98■■■□□ 2,55
TraipQ8VIG6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30,95■■■□□ 2,55
TraipQ8VIG6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,93■■■□□ 2,54
TraipQ8VIG6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,93■■■□□ 2,54
TraipQ8VIG6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
TraipQ8VIG6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,83■■■□□ 2,53
TraipQ8VIG6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
TraipQ8VIG6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
TraipQ8VIG6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,77■■■□□ 2,52
TraipQ8VIG6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,76■■■□□ 2,51
TraipQ8VIG6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
TraipQ8VIG6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,66■■■□□ 2,5
TraipQ8VIG6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,66■■■□□ 2,5
TraipQ8VIG6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,65■■■□□ 2,5
TraipQ8VIG6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,63■■■□□ 2,49
TraipQ8VIG6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,59■■■□□ 2,49
TraipQ8VIG6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
TraipQ8VIG6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
TraipQ8VIG6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,54■■■□□ 2,48
TraipQ8VIG6 Gm26115-201ENSMUST00000175605 87 ntBASIC30,51■■■□□ 2,47
TraipQ8VIG6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,5■■■□□ 2,47
TraipQ8VIG6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,48■■■□□ 2,47
TraipQ8VIG6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
TraipQ8VIG6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
TraipQ8VIG6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,44■■■□□ 2,46
TraipQ8VIG6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,41■■■□□ 2,46
TraipQ8VIG6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
TraipQ8VIG6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,36■■■□□ 2,45
TraipQ8VIG6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Retrieved 100 of 76,532 protein–RNA pairs in 17,1 ms