RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	BOL1	Q3E793	110 aa		5.77	□□□□□ -1.49
VTS1	YOR359W	RPS22A	P0C0W1	130 aa	Known RBP	5.76	□□□□□ -1.49
VTS1	YOR359W	YOL162W	P0CF19	215 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	PDE1	P22434	369 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	MRS4	P23500	304 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	SPO13	P23624	291 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	ERV1	P27882	189 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	AHT1	P29589	182 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	KNH1	P50112	268 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	SDC1	Q03323	175 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	MZM1	Q03429	123 aa	Predicted RBP	5.76	□□□□□ -1.49
VTS1	YOR359W	GEP3	Q08622	556 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	SNF11	P38956	169 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	CCS1	P40202	249 aa	Known RBP	5.76	□□□□□ -1.49
VTS1	YOR359W	MRPL49	P40858	161 aa	Predicted RBP	5.76	□□□□□ -1.49
VTS1	YOR359W	BXI1	P48558	297 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	GRX8	Q05926	109 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	YFH1	Q07540	174 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	FCY1	Q12178	158 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	YDL180W	Q12301	547 aa		5.76	□□□□□ -1.49
VTS1	YOR359W	SMT3	Q12306	101 aa	Known RBP	5.76	□□□□□ -1.49
VTS1	YOR359W	RPB8	P20436	146 aa		5.75	□□□□□ -1.49
VTS1	YOR359W	ERG4	P25340	473 aa		5.75	□□□□□ -1.49
VTS1	YOR359W	YBR184W	P38299	523 aa		5.75	□□□□□ -1.49
VTS1	YOR359W	YMR103C	Q04436	120 aa		5.75	□□□□□ -1.49
VTS1	YOR359W	RXT3	Q07458	294 aa		5.75	□□□□□ -1.49
VTS1	YOR359W	YDR215C	Q12240	137 aa		5.75	□□□□□ -1.49
VTS1	YOR359W	DFM1	Q12743	341 aa	Known RBP	5.75	□□□□□ -1.49
VTS1	YOR359W	SOD1	P00445	154 aa	Known RBP	5.74	□□□□□ -1.49
VTS1	YOR359W	PBI2	P0CT04	75 aa	Known RBP	5.74	□□□□□ -1.49
VTS1	YOR359W	MMS2	P53152	137 aa		5.74	□□□□□ -1.49
VTS1	YOR359W	TPC1	P53257	314 aa		5.74	□□□□□ -1.49
VTS1	YOR359W	RAF1	Q06891	181 aa		5.74	□□□□□ -1.49
VTS1	YOR359W	YOR097C	Q12274	175 aa	Predicted RBP	5.74	□□□□□ -1.49
VTS1	YOR359W	COA2	Q3E823	68 aa		5.74	□□□□□ -1.49
VTS1	YOR359W	CCH1	P50077	2039 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	RNQ1	P25367	405 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	AUR1	P36107	401 aa	Predicted RBP	5.73	□□□□□ -1.49
VTS1	YOR359W	PAM17	P36147	197 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	YPT10	P38146	199 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	ELO1	P39540	310 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	MST28	P39552	234 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	YNL195C	P40168	261 aa		5.73	□□□□□ -1.49
VTS1	YOR359W	MSO1	P53604	210 aa	Known RBP	5.73	□□□□□ -1.49
VTS1	YOR359W	SNT309	Q06091	175 aa	Predicted RBP	5.73	□□□□□ -1.49
VTS1	YOR359W	YCR025C	P25352	136 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	BRR6	P53062	197 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	SWT21	P53873	357 aa	Predicted RBP	5.72	□□□□□ -1.49
VTS1	YOR359W	MPD1	Q12404	318 aa	Known RBP	5.72	□□□□□ -1.49
VTS1	YOR359W	TRP1	P00912	224 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	TOM6	P33448	61 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	YBL059W	P34224	193 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	DSK2	P48510	373 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	SLG1	P54867	378 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	MRX11	Q03079	207 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	AYT1	Q12226	474 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	DAD1	Q12248	94 aa		5.72	□□□□□ -1.49
VTS1	YOR359W	YCR050C	P25630	102 aa		5.71	□□□□□ -1.5
VTS1	YOR359W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
VTS1	YOR359W	POP3	P53833	195 aa	Predicted RBP	5.71	□□□□□ -1.5
VTS1	YOR359W	MIX17	Q03667	156 aa		5.71	□□□□□ -1.5
VTS1	YOR359W	RFM1	Q12192	310 aa		5.71	□□□□□ -1.5
VTS1	YOR359W	YNL277W-A	Q3E7Z0	62 aa		5.71	□□□□□ -1.5
VTS1	YOR359W	Q0182	Q9ZZW1	134 aa		5.71	□□□□□ -1.5
VTS1	YOR359W	REC104	P33323	182 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	YKL044W	P36092	106 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	FMP46	P36141	133 aa	Known RBP	5.7	□□□□□ -1.5
VTS1	YOR359W	NRG2	P38082	220 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	ECM34	P38728	170 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	SFT1	P43682	97 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	TDA4	P47153	279 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	YGR164W	P53291	111 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	YGR219W	P53307	113 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	COX12	Q01519	83 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	PIR3	Q03180	325 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	YOR292C	Q08743	309 aa		5.7	□□□□□ -1.5
VTS1	YOR359W	MDM10	P18409	493 aa		5.69	□□□□□ -1.5
VTS1	YOR359W	MLF3	P32047	452 aa		5.69	□□□□□ -1.5
VTS1	YOR359W	YER181C	P40097	107 aa		5.69	□□□□□ -1.5
VTS1	YOR359W	YCL021W-A	Q96VH3	125 aa		5.69	□□□□□ -1.5
VTS1	YOR359W	YLR149C	Q99296	730 aa		5.69	□□□□□ -1.5
VTS1	YOR359W	QCR9	P22289	66 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	MTC7	P32633	139 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	YHL042W	P38729	150 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	YNL200C	P40165	246 aa	Known RBP	5.68	□□□□□ -1.5
VTS1	YOR359W	DFG10	P40526	253 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	BRP1	P53194	125 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	CRH1	P53301	507 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	YLR152C	P54072	576 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	MOT3	P54785	490 aa	Known RBP	5.68	□□□□□ -1.5
VTS1	YOR359W	GPI19	Q04082	140 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	IRC25	Q07951	179 aa		5.68	□□□□□ -1.5
VTS1	YOR359W	RPL2A	P0CX45	254 aa	Known RBP	5.67	□□□□□ -1.5
VTS1	YOR359W	RPL2B	P0CX46	254 aa	Known RBP	5.67	□□□□□ -1.5
VTS1	YOR359W	YHL018W	P38744	120 aa	Predicted RBP	5.67	□□□□□ -1.5
VTS1	YOR359W	SVP26	P38869	228 aa		5.67	□□□□□ -1.5
VTS1	YOR359W	LYS1	P38998	373 aa	RIP-Chip data	5.67	□□□□□ -1.5	RIP-Chip
VTS1	YOR359W	IST3	P40565	148 aa	Predicted RBP	5.67	□□□□□ -1.5
VTS1	YOR359W	TOM40	P23644	387 aa	Known RBP	5.67	□□□□□ -1.5
VTS1	YOR359W	HSK3	P69852	69 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms