RNA–Protein interactions for RNA: YOR297C

TIM18, Transcript of Component of the mitochondrial TIM22 complex, yeast

Gene TIM18, Length 579 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM18	YOR297C	DER1	P38307	211 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	FYV4	P38783	130 aa	Predicted RBP	0.85	□□□□□ -2.27
TIM18	YOR297C	TVP23	P38962	199 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	SPC25	P40014	221 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	NSA2	P40078	261 aa	Known RBP	0.85	□□□□□ -2.27
TIM18	YOR297C	ERJ5	P43613	295 aa	Predicted RBP	0.85	□□□□□ -2.27
TIM18	YOR297C	XPT1	P47165	209 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	YGL235W	P53071	178 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	TIM13	P53299	105 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	MPA43	P53583	542 aa	Predicted RBP	0.85	□□□□□ -2.27
TIM18	YOR297C	TMA20	P89886	181 aa	Predicted RBP	0.85	□□□□□ -2.27
TIM18	YOR297C	GAL83	Q04739	417 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	YMR253C	Q04835	414 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	IRC23	Q08416	157 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	FYV12	Q08559	129 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	DAS2	Q12084	232 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	ATP20	Q12233	115 aa		0.85	□□□□□ -2.27
TIM18	YOR297C	RPS28B	P0C0X0	67 aa	Known RBP	0.84	□□□□□ -2.27
TIM18	YOR297C	NSP1	P14907	823 aa	Known RBP	0.84	□□□□□ -2.27
TIM18	YOR297C	NUF2	P33895	451 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	YKR045C	P36138	183 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	FIG1	P38224	298 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	CSH1	P38287	376 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	YER135C	P40082	130 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	CUP9	P41817	306 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	YFH7	P43591	353 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	YGL101W	P53144	215 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	YNL033W	P53964	284 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	DAD4	P69851	72 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	DIG2	Q03373	323 aa	Known RBP	0.84	□□□□□ -2.27
TIM18	YOR297C	THI74	Q04083	370 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	RNH202	Q05635	350 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	YPR127W	Q06494	345 aa		0.84	□□□□□ -2.27
TIM18	YOR297C	EFG1	Q3E705	233 aa	Known RBP	0.84	□□□□□ -2.27
TIM18	YOR297C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.84	□□□□□ -2.27
TIM18	YOR297C	BPH1	P25356	2167 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	PBI2	P0CT04	75 aa	Known RBP	0.83	□□□□□ -2.28
TIM18	YOR297C	RRT1	P38192	103 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YBR219C	P38317	127 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YBR220C	P38318	560 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YPL073C	P40323	161 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	SBH1	P52870	82 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	ORM1	P53224	222 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YLR162W	Q06235	118 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YPR174C	Q06616	221 aa	Predicted RBP	0.83	□□□□□ -2.28
TIM18	YOR297C	PRP11	Q07350	266 aa	Predicted RBP	0.83	□□□□□ -2.28
TIM18	YOR297C	YPR013C	Q12145	317 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YLR046C	Q12253	270 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	YOR214C	Q12282	236 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	MOT1	P32333	1867 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	FLO9	P39712	1322 aa		0.83	□□□□□ -2.28
TIM18	YOR297C	MDM35	O60200	86 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	UBI4	P0CG63	381 aa	Known RBP	0.82	□□□□□ -2.28
TIM18	YOR297C	STP22	P25604	385 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	HSP30	P25619	332 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	UPS2	P35200	230 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	SLM6	P38343	150 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	YHL018W	P38744	120 aa	Predicted RBP	0.82	□□□□□ -2.28
TIM18	YOR297C	GLR1	P41921	483 aa	Known RBP	0.82	□□□□□ -2.28
TIM18	YOR297C	SBH2	P52871	88 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	THG1	P53215	237 aa	Known RBP	0.82	□□□□□ -2.28
TIM18	YOR297C	LSM3	P57743	89 aa	Known RBP	0.82	□□□□□ -2.28
TIM18	YOR297C	YKR005C	Q02203	525 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	VPS28	Q02767	242 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	CSI2	Q08054	341 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	HRD1	Q08109	551 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	YPR202W	Q08993	238 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	YOR015W	Q12169	119 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	PST2	Q12335	198 aa	Known RBP	0.82	□□□□□ -2.28
TIM18	YOR297C	YOR381W-A	Q3E804	55 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	PET20	Q99373	253 aa		0.82	□□□□□ -2.28
TIM18	YOR297C	YLR422W	Q06409	1932 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	COX8	P04039	78 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	RAD6	P06104	172 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	YGL010W	P25338	174 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	BUB2	P26448	306 aa	Predicted RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	UBC8	P28263	218 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	GSP2	P32836	220 aa	Known RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	SFK1	P35735	353 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	SRP102	P36057	244 aa	Predicted RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	SRX1	P36077	127 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	RIO2	P40160	425 aa	Known RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	RPL13B	P40212	199 aa	Known RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	DLS1	P40366	167 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	APQ12	P40532	138 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	MOG1	P47123	218 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	NQM1	P53228	333 aa	Predicted RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	YDR391C	Q04170	232 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	RIM9	Q04734	239 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	YHR007C-A	Q07074	71 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	FIT2	Q08906	153 aa		0.81	□□□□□ -2.28
TIM18	YOR297C	RPL13A	Q12690	199 aa	Predicted RBP	0.81	□□□□□ -2.28
TIM18	YOR297C	ATP5	P09457	212 aa		0.8	□□□□□ -2.28
TIM18	YOR297C	RPL2A	P0CX45	254 aa	Known RBP	0.8	□□□□□ -2.28
TIM18	YOR297C	RPL2B	P0CX46	254 aa	Known RBP	0.8	□□□□□ -2.28
TIM18	YOR297C	GPA2	P10823	449 aa		0.8	□□□□□ -2.28
TIM18	YOR297C	RPL30	P14120	105 aa	Known RBP	0.8	□□□□□ -2.28
TIM18	YOR297C	MAK31	P23059	88 aa		0.8	□□□□□ -2.28
TIM18	YOR297C	PEX34	P25584	144 aa		0.8	□□□□□ -2.28
TIM18	YOR297C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms