RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C AHC2P25649 128 aa1.25□□□□□ -2.21
RPN8YOR261C FMP32P43557 207 aa1.25□□□□□ -2.21
RPN8YOR261C YOR015WQ12169 119 aa1.25□□□□□ -2.21
RPN8YOR261C USO1P25386 1790 aa1.24□□□□□ -2.21
RPN8YOR261C RSF2P46974 1380 aa1.24□□□□□ -2.21
RPN8YOR261C STP22P25604 385 aa1.24□□□□□ -2.21
RPN8YOR261C YKL102CP34249 101 aa1.24□□□□□ -2.21
RPN8YOR261C SOL1P50278 321 aa1.24□□□□□ -2.21
RPN8YOR261C GPI17Q04080 534 aa1.24□□□□□ -2.21
RPN8YOR261C MPD1Q12404 318 aaKnown RBP1.24□□□□□ -2.21
RPN8YOR261C PEX11Q12462 236 aa1.24□□□□□ -2.21
RPN8YOR261C RPO41P13433 1351 aaKnown RBP1.23□□□□□ -2.21
RPN8YOR261C ROM2P51862 1356 aaKnown RBP1.23□□□□□ -2.21
RPN8YOR261C SEC14P24280 304 aaKnown RBP1.23□□□□□ -2.21
RPN8YOR261C CDC39P25655 2108 aaKnown RBP1.23□□□□□ -2.21
RPN8YOR261C RRT1P38192 103 aa1.23□□□□□ -2.21
RPN8YOR261C YHL037CP38733 133 aa1.23□□□□□ -2.21
RPN8YOR261C STF2P16965 84 aa1.22□□□□□ -2.21
RPN8YOR261C ETR1P38071 380 aa1.22□□□□□ -2.21
RPN8YOR261C FES1P38260 290 aa1.22□□□□□ -2.21
RPN8YOR261C SBH1P52870 82 aa1.22□□□□□ -2.21
RPN8YOR261C GRX5Q02784 150 aa1.22□□□□□ -2.21
RPN8YOR261C PIR1Q03178 341 aa1.22□□□□□ -2.21
RPN8YOR261C YHP1Q04116 353 aa1.22□□□□□ -2.21
RPN8YOR261C HPT1Q04178 221 aaKnown RBP1.22□□□□□ -2.21
RPN8YOR261C YLR050CQ12155 161 aaKnown RBP1.22□□□□□ -2.21
RPN8YOR261C RRP5Q05022 1729 aaKnown RBP1.22□□□□□ -2.21
RPN8YOR261C YRF1-2P40105 1681 aa1.22□□□□□ -2.21
RPN8YOR261C HFA1P32874 2273 aa1.22□□□□□ -2.21
RPN8YOR261C AHT1P29589 182 aa1.21□□□□□ -2.22
RPN8YOR261C AME1P38313 324 aa1.21□□□□□ -2.22
RPN8YOR261C RFC2P40348 353 aa1.21□□□□□ -2.22
RPN8YOR261C NSE4P43124 402 aa1.21□□□□□ -2.22
RPN8YOR261C HSK3P69852 69 aa1.21□□□□□ -2.22
RPN8YOR261C UPS1Q05776 175 aa1.21□□□□□ -2.22
RPN8YOR261C DGK1Q12382 290 aa1.21□□□□□ -2.22
RPN8YOR261C DUR1,2P32528 1835 aaKnown RBP1.21□□□□□ -2.22
RPN8YOR261C LYS2P07702 1392 aa1.21□□□□□ -2.22
RPN8YOR261C TY4B-HP0C2J7 1802 aa1.2□□□□□ -2.22
RPN8YOR261C TY4B-JP47024 1803 aa1.2□□□□□ -2.22
RPN8YOR261C QCR2P07257 368 aa1.2□□□□□ -2.22
RPN8YOR261C YBL010CP32788 280 aa1.2□□□□□ -2.22
RPN8YOR261C UBC6P33296 250 aaPredicted RBP1.2□□□□□ -2.22
RPN8YOR261C CPR5P35176 225 aa1.2□□□□□ -2.22
RPN8YOR261C CSH1P38287 376 aa1.2□□□□□ -2.22
RPN8YOR261C GAL83Q04739 417 aa1.2□□□□□ -2.22
RPN8YOR261C APC1P53886 1748 aa1.2□□□□□ -2.22
RPN8YOR261C CMD1P06787 147 aaKnown RBP1.19□□□□□ -2.22
RPN8YOR261C SNF2P22082 1703 aa1.19□□□□□ -2.22
RPN8YOR261C UGX2P32772 223 aa1.19□□□□□ -2.22
RPN8YOR261C DML1Q03652 475 aa1.19□□□□□ -2.22
RPN8YOR261C ELP6Q04868 273 aa1.19□□□□□ -2.22
RPN8YOR261C RDI1Q12434 202 aa1.19□□□□□ -2.22
RPN8YOR261C MLP1Q02455 1875 aaKnown RBP1.18□□□□□ -2.22
RPN8YOR261C MAK31P23059 88 aa1.18□□□□□ -2.22
RPN8YOR261C DER1P38307 211 aa1.18□□□□□ -2.22
RPN8YOR261C FYV4P38783 130 aaPredicted RBP1.18□□□□□ -2.22
RPN8YOR261C TTI2P47168 421 aa1.18□□□□□ -2.22
RPN8YOR261C EFM5P53200 248 aaKnown RBP1.18□□□□□ -2.22
RPN8YOR261C PLP1Q04004 230 aa1.18□□□□□ -2.22
RPN8YOR261C YLR053CQ12026 108 aa1.18□□□□□ -2.22
RPN8YOR261C FKS3Q04952 1785 aa1.18□□□□□ -2.22
RPN8YOR261C URB1P34241 1764 aaKnown RBP1.17□□□□□ -2.22
RPN8YOR261C RPS28BP0C0X0 67 aaKnown RBP1.17□□□□□ -2.22
RPN8YOR261C FIG1P38224 298 aa1.17□□□□□ -2.22
RPN8YOR261C SLM6P38343 150 aa1.17□□□□□ -2.22
RPN8YOR261C YNL200CP40165 246 aaKnown RBP1.17□□□□□ -2.22
RPN8YOR261C YFL051CP43552 160 aa1.17□□□□□ -2.22
RPN8YOR261C THI74Q04083 370 aa1.17□□□□□ -2.22
RPN8YOR261C ATG41Q12048 136 aa1.17□□□□□ -2.22
RPN8YOR261C YMR030W-AQ3E760 96 aa1.17□□□□□ -2.22
RPN8YOR261C RPS28AQ3E7X9 67 aaPredicted RBP1.17□□□□□ -2.22
RPN8YOR261C YOR381W-AQ3E804 55 aa1.17□□□□□ -2.22
RPN8YOR261C CCS1P40202 249 aaKnown RBP1.16□□□□□ -2.22
RPN8YOR261C SBH2P52871 88 aa1.16□□□□□ -2.22
RPN8YOR261C TIM13P53299 105 aa1.16□□□□□ -2.22
RPN8YOR261C TMA20P89886 181 aaPredicted RBP1.16□□□□□ -2.22
RPN8YOR261C VPS28Q02767 242 aa1.16□□□□□ -2.22
RPN8YOR261C FIT1Q04433 528 aa1.16□□□□□ -2.22
RPN8YOR261C YPR127WQ06494 345 aa1.16□□□□□ -2.22
RPN8YOR261C YPR202WQ08993 238 aa1.16□□□□□ -2.22
RPN8YOR261C NSL1Q12143 216 aa1.16□□□□□ -2.22
RPN8YOR261C YOR214CQ12282 236 aa1.16□□□□□ -2.22
RPN8YOR261C PET20Q99373 253 aa1.16□□□□□ -2.22
RPN8YOR261C UBI4P0CG63 381 aaKnown RBP1.15□□□□□ -2.23
RPN8YOR261C HSP30P25619 332 aa1.15□□□□□ -2.23
RPN8YOR261C XPT1P47165 209 aa1.15□□□□□ -2.23
RPN8YOR261C YGL101WP53144 215 aa1.15□□□□□ -2.23
RPN8YOR261C ORM1P53224 222 aa1.15□□□□□ -2.23
RPN8YOR261C YKR005CQ02203 525 aa1.15□□□□□ -2.23
RPN8YOR261C MAK3Q03503 176 aa1.15□□□□□ -2.23
RPN8YOR261C RAD50P12753 1312 aa1.15□□□□□ -2.23
RPN8YOR261C UBR1P19812 1950 aa1.14□□□□□ -2.23
RPN8YOR261C YRF1-3P0CX14 1859 aa1.14□□□□□ -2.23
RPN8YOR261C YRF1-7P0CX15 1859 aa1.14□□□□□ -2.23
RPN8YOR261C YRF1-6P53819 1859 aa1.14□□□□□ -2.23
RPN8YOR261C RIM9Q04734 239 aa1.14□□□□□ -2.23
RPN8YOR261C RIM15P43565 1770 aa1.13□□□□□ -2.23
RPN8YOR261C BUB2P26448 306 aaPredicted RBP1.13□□□□□ -2.23
RPN8YOR261C YRA2P36036 203 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms