RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	CDH1	P53197	566 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	TPC1	P53257	314 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	CRH1	P53301	507 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	PIR3	Q03180	325 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YFH1	Q07540	174 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YDR029W	Q12111	104 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YDL180W	Q12301	547 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YDR119W-A	Q2V2P9	66 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YAL063C-A	Q3E791	96 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YFL041W-A	Q3E817	63 aa		3.19	□□□□□ -1.9
ABP140	YOR239W	YSR3	P23501	404 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	CSE2	P33308	149 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	YBL059W	P34224	193 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	MID2	P36027	376 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	CCS1	P40202	249 aa	Known RBP	3.18	□□□□□ -1.9
ABP140	YOR239W	YFR057W	P43625	151 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	BRP1	P53194	125 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	MSO1	P53604	210 aa	Known RBP	3.18	□□□□□ -1.9
ABP140	YOR239W	POP3	P53833	195 aa	Predicted RBP	3.18	□□□□□ -1.9
ABP140	YOR239W	AQR1	P53943	586 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	MIX17	Q03667	156 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	SNT309	Q06091	175 aa	Predicted RBP	3.18	□□□□□ -1.9
ABP140	YOR239W	HPA2	Q06592	156 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	FIT3	Q08907	204 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	YDR215C	Q12240	137 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	PHO85	P17157	305 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	QCR9	P22289	66 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	YPT10	P38146	199 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	YNL200C	P40165	246 aa	Known RBP	3.18	□□□□□ -1.9
ABP140	YOR239W	YNL194C	P40169	301 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	CDC1	P40986	491 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	GON7	P46984	123 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	LCB3	P47013	409 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	CAX4	P53223	239 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	CPD1	P53314	239 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	MRPL51	Q06090	140 aa	Predicted RBP	3.18	□□□□□ -1.9
ABP140	YOR239W	GEP3	Q08622	556 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	AYT1	Q12226	474 aa		3.18	□□□□□ -1.9
ABP140	YOR239W	RFA3	P26755	122 aa	Known RBP	3.17	□□□□□ -1.9
ABP140	YOR239W	SPC29	P33419	253 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	PRS4	P38063	326 aa	Predicted RBP	3.17	□□□□□ -1.9
ABP140	YOR239W	DFG10	P40526	253 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	YIR016W	P40572	265 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	TDA4	P47153	279 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	UBC9	P50623	157 aa	Predicted RBP	3.17	□□□□□ -1.9
ABP140	YOR239W	YLR152C	P54072	576 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	RRG8	Q06109	277 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	RDL2	Q08742	149 aa	Known RBP	3.17	□□□□□ -1.9
ABP140	YOR239W	YOR029W	Q12243	111 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	FLO9	P39712	1322 aa		3.17	□□□□□ -1.9
ABP140	YOR239W	PDE1	P22434	369 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	FUB1	P25659	250 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	QRI5	P32344	111 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	ERG2	P32352	222 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YKL044W	P36092	106 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YKR041W	P36134	250 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	MST28	P39552	234 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	KNH1	P50112	268 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YNL143C	P53908	130 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	ERG13	P54839	491 aa	Known RBP	3.16	□□□□□ -1.9
ABP140	YOR239W	COX12	Q01519	83 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	MPD1	Q12404	318 aa	Known RBP	3.16	□□□□□ -1.9
ABP140	YOR239W	DFM1	Q12743	341 aa	Known RBP	3.16	□□□□□ -1.9
ABP140	YOR239W	YLR412C-A	Q3E742	68 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	GLT1	Q12680	2145 aa	Known RBP	3.16	□□□□□ -1.9
ABP140	YOR239W	YLL053C	P0CD98	152 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	IML3	P38265	245 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YFR020W	P43600	232 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	RHO5	P53879	331 aa	Known RBP	3.16	□□□□□ -1.9
ABP140	YOR239W	SNP1	Q00916	300 aa	Predicted RBP	3.16	□□□□□ -1.9
ABP140	YOR239W	YPL039W	Q03080	316 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YMR320W	Q04897	101 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YDL211C	Q12121	372 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	YKL183C-A	Q3E765	70 aa		3.16	□□□□□ -1.9
ABP140	YOR239W	ERV1	P27882	189 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	YER181C	P40097	107 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	YGR269W	P40326	108 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	DSK2	P48510	373 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	YNR071C	P53757	342 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	YLR042C	Q07990	161 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	YOR292C	Q08743	309 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	RFM1	Q12192	310 aa		3.15	□□□□□ -1.91
ABP140	YOR239W	MRPS5	P33759	307 aa		3.14	□□□□□ -1.91
ABP140	YOR239W	YPL073C	P40323	161 aa		3.14	□□□□□ -1.91
ABP140	YOR239W	BRR6	P53062	197 aa		3.14	□□□□□ -1.91
ABP140	YOR239W	YMR103C	Q04436	120 aa		3.14	□□□□□ -1.91
ABP140	YOR239W	FCY1	Q12178	158 aa		3.14	□□□□□ -1.91
ABP140	YOR239W	YOR097C	Q12274	175 aa	Predicted RBP	3.14	□□□□□ -1.91
ABP140	YOR239W	RPL11A	P0C0W9	174 aa	Known RBP	3.13	□□□□□ -1.91
ABP140	YOR239W	YMR31	P19955	123 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	REC114	P32841	428 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	TOM6	P33448	61 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	SRX1	P36077	127 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	ECM34	P38728	170 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	YHL042W	P38729	150 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	RPP1	P38786	293 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	YIL163C	P40448	117 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	HST4	P53688	370 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	YIL014C-A	Q02598	104 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	COF1	Q03048	143 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms