RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W CDH1P53197 566 aa3.19□□□□□ -1.9
ABP140YOR239W TPC1P53257 314 aa3.19□□□□□ -1.9
ABP140YOR239W CRH1P53301 507 aa3.19□□□□□ -1.9
ABP140YOR239W PIR3Q03180 325 aa3.19□□□□□ -1.9
ABP140YOR239W YFH1Q07540 174 aa3.19□□□□□ -1.9
ABP140YOR239W YDR029WQ12111 104 aa3.19□□□□□ -1.9
ABP140YOR239W YDL180WQ12301 547 aa3.19□□□□□ -1.9
ABP140YOR239W YDR119W-AQ2V2P9 66 aa3.19□□□□□ -1.9
ABP140YOR239W YAL063C-AQ3E791 96 aa3.19□□□□□ -1.9
ABP140YOR239W YFL041W-AQ3E817 63 aa3.19□□□□□ -1.9
ABP140YOR239W YSR3P23501 404 aa3.18□□□□□ -1.9
ABP140YOR239W CSE2P33308 149 aa3.18□□□□□ -1.9
ABP140YOR239W YBL059WP34224 193 aa3.18□□□□□ -1.9
ABP140YOR239W MID2P36027 376 aa3.18□□□□□ -1.9
ABP140YOR239W CCS1P40202 249 aaKnown RBP3.18□□□□□ -1.9
ABP140YOR239W YFR057WP43625 151 aa3.18□□□□□ -1.9
ABP140YOR239W BRP1P53194 125 aa3.18□□□□□ -1.9
ABP140YOR239W MSO1P53604 210 aaKnown RBP3.18□□□□□ -1.9
ABP140YOR239W POP3P53833 195 aaPredicted RBP3.18□□□□□ -1.9
ABP140YOR239W AQR1P53943 586 aa3.18□□□□□ -1.9
ABP140YOR239W MIX17Q03667 156 aa3.18□□□□□ -1.9
ABP140YOR239W SNT309Q06091 175 aaPredicted RBP3.18□□□□□ -1.9
ABP140YOR239W HPA2Q06592 156 aa3.18□□□□□ -1.9
ABP140YOR239W FIT3Q08907 204 aa3.18□□□□□ -1.9
ABP140YOR239W YDR215CQ12240 137 aa3.18□□□□□ -1.9
ABP140YOR239W PHO85P17157 305 aa3.18□□□□□ -1.9
ABP140YOR239W QCR9P22289 66 aa3.18□□□□□ -1.9
ABP140YOR239W YPT10P38146 199 aa3.18□□□□□ -1.9
ABP140YOR239W YNL200CP40165 246 aaKnown RBP3.18□□□□□ -1.9
ABP140YOR239W YNL194CP40169 301 aa3.18□□□□□ -1.9
ABP140YOR239W CDC1P40986 491 aa3.18□□□□□ -1.9
ABP140YOR239W GON7P46984 123 aa3.18□□□□□ -1.9
ABP140YOR239W LCB3P47013 409 aa3.18□□□□□ -1.9
ABP140YOR239W CAX4P53223 239 aa3.18□□□□□ -1.9
ABP140YOR239W CPD1P53314 239 aa3.18□□□□□ -1.9
ABP140YOR239W MRPL51Q06090 140 aaPredicted RBP3.18□□□□□ -1.9
ABP140YOR239W GEP3Q08622 556 aa3.18□□□□□ -1.9
ABP140YOR239W AYT1Q12226 474 aa3.18□□□□□ -1.9
ABP140YOR239W RFA3P26755 122 aaKnown RBP3.17□□□□□ -1.9
ABP140YOR239W SPC29P33419 253 aa3.17□□□□□ -1.9
ABP140YOR239W PRS4P38063 326 aaPredicted RBP3.17□□□□□ -1.9
ABP140YOR239W DFG10P40526 253 aa3.17□□□□□ -1.9
ABP140YOR239W YIR016WP40572 265 aa3.17□□□□□ -1.9
ABP140YOR239W TDA4P47153 279 aa3.17□□□□□ -1.9
ABP140YOR239W UBC9P50623 157 aaPredicted RBP3.17□□□□□ -1.9
ABP140YOR239W YLR152CP54072 576 aa3.17□□□□□ -1.9
ABP140YOR239W RRG8Q06109 277 aa3.17□□□□□ -1.9
ABP140YOR239W RDL2Q08742 149 aaKnown RBP3.17□□□□□ -1.9
ABP140YOR239W YOR029WQ12243 111 aa3.17□□□□□ -1.9
ABP140YOR239W FLO9P39712 1322 aa3.17□□□□□ -1.9
ABP140YOR239W PDE1P22434 369 aa3.16□□□□□ -1.9
ABP140YOR239W FUB1P25659 250 aa3.16□□□□□ -1.9
ABP140YOR239W QRI5P32344 111 aa3.16□□□□□ -1.9
ABP140YOR239W ERG2P32352 222 aa3.16□□□□□ -1.9
ABP140YOR239W YKL044WP36092 106 aa3.16□□□□□ -1.9
ABP140YOR239W YKR041WP36134 250 aa3.16□□□□□ -1.9
ABP140YOR239W MST28P39552 234 aa3.16□□□□□ -1.9
ABP140YOR239W KNH1P50112 268 aa3.16□□□□□ -1.9
ABP140YOR239W YNL143CP53908 130 aa3.16□□□□□ -1.9
ABP140YOR239W ERG13P54839 491 aaKnown RBP3.16□□□□□ -1.9
ABP140YOR239W COX12Q01519 83 aa3.16□□□□□ -1.9
ABP140YOR239W MPD1Q12404 318 aaKnown RBP3.16□□□□□ -1.9
ABP140YOR239W DFM1Q12743 341 aaKnown RBP3.16□□□□□ -1.9
ABP140YOR239W YLR412C-AQ3E742 68 aa3.16□□□□□ -1.9
ABP140YOR239W GLT1Q12680 2145 aaKnown RBP3.16□□□□□ -1.9
ABP140YOR239W YLL053CP0CD98 152 aa3.16□□□□□ -1.9
ABP140YOR239W IML3P38265 245 aa3.16□□□□□ -1.9
ABP140YOR239W YFR020WP43600 232 aa3.16□□□□□ -1.9
ABP140YOR239W RHO5P53879 331 aaKnown RBP3.16□□□□□ -1.9
ABP140YOR239W SNP1Q00916 300 aaPredicted RBP3.16□□□□□ -1.9
ABP140YOR239W YPL039WQ03080 316 aa3.16□□□□□ -1.9
ABP140YOR239W YMR320WQ04897 101 aa3.16□□□□□ -1.9
ABP140YOR239W YDL211CQ12121 372 aa3.16□□□□□ -1.9
ABP140YOR239W YKL183C-AQ3E765 70 aa3.16□□□□□ -1.9
ABP140YOR239W ERV1P27882 189 aa3.15□□□□□ -1.91
ABP140YOR239W YER181CP40097 107 aa3.15□□□□□ -1.91
ABP140YOR239W YGR269WP40326 108 aa3.15□□□□□ -1.91
ABP140YOR239W DSK2P48510 373 aa3.15□□□□□ -1.91
ABP140YOR239W YNR071CP53757 342 aa3.15□□□□□ -1.91
ABP140YOR239W YLR042CQ07990 161 aa3.15□□□□□ -1.91
ABP140YOR239W YOR292CQ08743 309 aa3.15□□□□□ -1.91
ABP140YOR239W RFM1Q12192 310 aa3.15□□□□□ -1.91
ABP140YOR239W MRPS5P33759 307 aa3.14□□□□□ -1.91
ABP140YOR239W YPL073CP40323 161 aa3.14□□□□□ -1.91
ABP140YOR239W BRR6P53062 197 aa3.14□□□□□ -1.91
ABP140YOR239W YMR103CQ04436 120 aa3.14□□□□□ -1.91
ABP140YOR239W FCY1Q12178 158 aa3.14□□□□□ -1.91
ABP140YOR239W YOR097CQ12274 175 aaPredicted RBP3.14□□□□□ -1.91
ABP140YOR239W RPL11AP0C0W9 174 aaKnown RBP3.13□□□□□ -1.91
ABP140YOR239W YMR31P19955 123 aa3.13□□□□□ -1.91
ABP140YOR239W REC114P32841 428 aa3.13□□□□□ -1.91
ABP140YOR239W TOM6P33448 61 aa3.13□□□□□ -1.91
ABP140YOR239W SRX1P36077 127 aa3.13□□□□□ -1.91
ABP140YOR239W ECM34P38728 170 aa3.13□□□□□ -1.91
ABP140YOR239W YHL042WP38729 150 aa3.13□□□□□ -1.91
ABP140YOR239W RPP1P38786 293 aa3.13□□□□□ -1.91
ABP140YOR239W YIL163CP40448 117 aa3.13□□□□□ -1.91
ABP140YOR239W HST4P53688 370 aa3.13□□□□□ -1.91
ABP140YOR239W YIL014C-AQ02598 104 aa3.13□□□□□ -1.91
ABP140YOR239W COF1Q03048 143 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 149.8 ms