RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C STF2P16965 84 aa2.18□□□□□ -2.06
ATG3YNR007C FMT1P32785 401 aa2.18□□□□□ -2.06
ATG3YNR007C ECM33P38248 429 aaKnown RBP2.18□□□□□ -2.06
ATG3YNR007C YPC1P38298 316 aa2.18□□□□□ -2.06
ATG3YNR007C YPT31P38555 223 aaKnown RBP2.18□□□□□ -2.06
ATG3YNR007C IPI1P38803 334 aaPredicted RBP2.18□□□□□ -2.06
ATG3YNR007C SNF11P38956 169 aa2.18□□□□□ -2.06
ATG3YNR007C HPA3P39979 161 aa2.18□□□□□ -2.06
ATG3YNR007C NSA2P40078 261 aaKnown RBP2.18□□□□□ -2.06
ATG3YNR007C CAT5P41735 233 aa2.18□□□□□ -2.06
ATG3YNR007C OTU1P43558 301 aa2.18□□□□□ -2.06
ATG3YNR007C NIF3P53081 288 aa2.18□□□□□ -2.06
ATG3YNR007C TPN1P53099 579 aa2.18□□□□□ -2.06
ATG3YNR007C LSM7P53905 115 aaKnown RBP2.18□□□□□ -2.06
ATG3YNR007C THI74Q04083 370 aa2.18□□□□□ -2.06
ATG3YNR007C GRH1Q04410 372 aaKnown RBP2.18□□□□□ -2.06
ATG3YNR007C PBP4Q07362 185 aaKnown RBP2.18□□□□□ -2.06
ATG3YNR007C YPR063CQ12160 140 aa2.18□□□□□ -2.06
ATG3YNR007C RDI1Q12434 202 aa2.18□□□□□ -2.06
ATG3YNR007C YAL067W-AQ8TGK6 75 aa2.18□□□□□ -2.06
ATG3YNR007C RPL16BP26785 198 aaKnown RBP2.17□□□□□ -2.06
ATG3YNR007C RNP1P32385 249 aa2.17□□□□□ -2.06
ATG3YNR007C UPS2P35200 230 aa2.17□□□□□ -2.06
ATG3YNR007C POP8P38208 133 aa2.17□□□□□ -2.06
ATG3YNR007C LST8P41318 303 aa2.17□□□□□ -2.06
ATG3YNR007C SWT21P53873 357 aaPredicted RBP2.17□□□□□ -2.06
ATG3YNR007C BUD25P85052 153 aa2.17□□□□□ -2.06
ATG3YNR007C UBC7Q02159 165 aa2.17□□□□□ -2.06
ATG3YNR007C YMR090WQ04304 227 aaKnown RBP2.17□□□□□ -2.06
ATG3YNR007C YLR179CQ06252 201 aaKnown RBP2.17□□□□□ -2.06
ATG3YNR007C SYM1Q06563 197 aa2.17□□□□□ -2.06
ATG3YNR007C YCR075W-AQ3E830 75 aa2.17□□□□□ -2.06
ATG3YNR007C HUG1Q6Q5K6 68 aa2.17□□□□□ -2.06
ATG3YNR007C PET494P07390 489 aaPredicted RBP2.16□□□□□ -2.06
ATG3YNR007C RPL31AP0C2H8 113 aaKnown RBP2.16□□□□□ -2.06
ATG3YNR007C MRPL20P22354 195 aaPredicted RBP2.16□□□□□ -2.06
ATG3YNR007C YCR016WP25617 290 aaKnown RBP2.16□□□□□ -2.06
ATG3YNR007C PAM16P42949 149 aa2.16□□□□□ -2.06
ATG3YNR007C ARP3P47117 449 aaKnown RBP2.16□□□□□ -2.06
ATG3YNR007C MCM22P47167 239 aa2.16□□□□□ -2.06
ATG3YNR007C PNC1P53184 216 aaKnown RBP2.16□□□□□ -2.06
ATG3YNR007C YGR050CP53231 118 aa2.16□□□□□ -2.06
ATG3YNR007C YNR066CP53752 436 aa2.16□□□□□ -2.06
ATG3YNR007C COX12Q01519 83 aa2.16□□□□□ -2.06
ATG3YNR007C IES3Q12345 250 aa2.16□□□□□ -2.06
ATG3YNR007C ARG80P07249 177 aa2.15□□□□□ -2.07
ATG3YNR007C SPS2P08459 502 aa2.15□□□□□ -2.07
ATG3YNR007C NHP6BP11633 99 aaKnown RBP2.15□□□□□ -2.07
ATG3YNR007C SPT14P32363 452 aa2.15□□□□□ -2.07
ATG3YNR007C CSH1P38287 376 aa2.15□□□□□ -2.07
ATG3YNR007C PET8P38921 284 aa2.15□□□□□ -2.07
ATG3YNR007C TDA4P47153 279 aa2.15□□□□□ -2.07
ATG3YNR007C PDR17P53844 350 aa2.15□□□□□ -2.07
ATG3YNR007C EST3Q03096 181 aa2.15□□□□□ -2.07
ATG3YNR007C LOA1Q06508 300 aa2.15□□□□□ -2.07
ATG3YNR007C YOL118CQ08259 102 aa2.15□□□□□ -2.07
ATG3YNR007C DFM1Q12743 341 aaKnown RBP2.15□□□□□ -2.07
ATG3YNR007C YHR213W-AQ8TGT4 77 aa2.15□□□□□ -2.07
ATG3YNR007C SEC22P22214 214 aa2.14□□□□□ -2.07
ATG3YNR007C YKR045CP36138 183 aa2.14□□□□□ -2.07
ATG3YNR007C AIM29P36154 155 aa2.14□□□□□ -2.07
ATG3YNR007C YBR242WP38331 238 aa2.14□□□□□ -2.07
ATG3YNR007C SLM6P38343 150 aa2.14□□□□□ -2.07
ATG3YNR007C VMA22P38784 181 aa2.14□□□□□ -2.07
ATG3YNR007C PET100P38958 111 aa2.14□□□□□ -2.07
ATG3YNR007C YIR035CP40579 254 aa2.14□□□□□ -2.07
ATG3YNR007C GPI2P46961 280 aa2.14□□□□□ -2.07
ATG3YNR007C SNX4P47057 423 aa2.14□□□□□ -2.07
ATG3YNR007C MIC27P50945 234 aa2.14□□□□□ -2.07
ATG3YNR007C VPS28Q02767 242 aa2.14□□□□□ -2.07
ATG3YNR007C SGF11Q03067 99 aa2.14□□□□□ -2.07
ATG3YNR007C YPR145C-AQ2V2P0 78 aa2.14□□□□□ -2.07
ATG3YNR007C YDR157WA0A023PZE8 133 aa2.13□□□□□ -2.07
ATG3YNR007C URA5P13298 226 aaKnown RBP2.13□□□□□ -2.07
ATG3YNR007C YRA2P36036 203 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
ATG3YNR007C ASP1P38986 381 aaPredicted RBP2.13□□□□□ -2.07
ATG3YNR007C YAR068WP39564 161 aa2.13□□□□□ -2.07
ATG3YNR007C YIA6P40556 373 aa2.13□□□□□ -2.07
ATG3YNR007C YGL118CP53132 145 aa2.13□□□□□ -2.07
ATG3YNR007C YIP3P53633 176 aa2.13□□□□□ -2.07
ATG3YNR007C HST4P53688 370 aa2.13□□□□□ -2.07
ATG3YNR007C SMD1Q02260 146 aaPredicted RBP2.13□□□□□ -2.07
ATG3YNR007C YMR244WQ04018 355 aa2.13□□□□□ -2.07
ATG3YNR007C ECM19Q06011 112 aa2.13□□□□□ -2.07
ATG3YNR007C ATG39Q06159 398 aa2.13□□□□□ -2.07
ATG3YNR007C VAM10Q08474 114 aa2.13□□□□□ -2.07
ATG3YNR007C FEX1Q08913 375 aa2.13□□□□□ -2.07
ATG3YNR007C YPL264CQ08980 353 aa2.13□□□□□ -2.07
ATG3YNR007C FEX2Q08991 375 aa2.13□□□□□ -2.07
ATG3YNR007C YLR146W-AQ2V2P1 62 aa2.13□□□□□ -2.07
ATG3YNR007C YNL146C-AQ3E7Z1 64 aa2.13□□□□□ -2.07
ATG3YNR007C PUT1P09368 476 aa2.12□□□□□ -2.07
ATG3YNR007C RPS25BP0C0T4 108 aaKnown RBP2.12□□□□□ -2.07
ATG3YNR007C RPL2AP0CX45 254 aaKnown RBP2.12□□□□□ -2.07
ATG3YNR007C RPL2BP0CX46 254 aaKnown RBP2.12□□□□□ -2.07
ATG3YNR007C CUP2P15315 225 aa2.12□□□□□ -2.07
ATG3YNR007C FCY2P17064 533 aa2.12□□□□□ -2.07
ATG3YNR007C COX10P21592 462 aa2.12□□□□□ -2.07
ATG3YNR007C QCR9P22289 66 aa2.12□□□□□ -2.07
ATG3YNR007C EMP24P32803 203 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms