RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YPT10P38146 199 aa7.07□□□□□ -1.28
RPD3YNL330C SFT2P38166 215 aa7.07□□□□□ -1.28
RPD3YNL330C TEM1P38987 245 aa7.07□□□□□ -1.28
RPD3YNL330C LST8P41318 303 aa7.07□□□□□ -1.28
RPD3YNL330C YGR018CP53211 109 aa7.07□□□□□ -1.28
RPD3YNL330C PKR1Q03880 122 aaKnown RBP7.07□□□□□ -1.28
RPD3YNL330C MRS1P07266 363 aa7.06□□□□□ -1.28
RPD3YNL330C SEC4P07560 215 aaKnown RBP7.06□□□□□ -1.28
RPD3YNL330C ZRT1P32804 376 aa7.06□□□□□ -1.28
RPD3YNL330C YJL028WP47062 111 aa7.06□□□□□ -1.28
RPD3YNL330C YNL046WP53956 172 aa7.06□□□□□ -1.28
RPD3YNL330C NDE2Q07500 545 aa7.06□□□□□ -1.28
RPD3YNL330C PAU23Q07987 124 aa7.06□□□□□ -1.28
RPD3YNL330C PAU17Q12370 124 aa7.06□□□□□ -1.28
RPD3YNL330C YCR007CP25354 239 aa7.05□□□□□ -1.28
RPD3YNL330C GSP1P32835 219 aaKnown RBP7.05□□□□□ -1.28
RPD3YNL330C GSP2P32836 220 aaKnown RBP7.05□□□□□ -1.28
RPD3YNL330C SEC72P39742 193 aaKnown RBP7.05□□□□□ -1.28
RPD3YNL330C TOM7P53507 60 aa7.05□□□□□ -1.28
RPD3YNL330C SED1Q01589 338 aa7.05□□□□□ -1.28
RPD3YNL330C YTH1Q06102 208 aaPredicted RBP7.05□□□□□ -1.28
RPD3YNL330C CSM4Q08955 156 aa7.05□□□□□ -1.28
RPD3YNL330C RPI1P23250 407 aaKnown RBP7.04□□□□□ -1.28
RPD3YNL330C LSM2P38203 95 aaKnown RBP7.04□□□□□ -1.28
RPD3YNL330C SGN1P40561 250 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RPD3YNL330C GZF3P42944 551 aaKnown RBP7.04□□□□□ -1.28
RPD3YNL330C TVP18Q04767 167 aa7.04□□□□□ -1.28
RPD3YNL330C YDL157CQ12082 118 aa7.04□□□□□ -1.28
RPD3YNL330C MSL5Q12186 476 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RPD3YNL330C COX17Q12287 69 aa7.04□□□□□ -1.28
RPD3YNL330C MIG1P27705 504 aa7.03□□□□□ -1.28
RPD3YNL330C PAU7P39545 55 aa7.03□□□□□ -1.28
RPD3YNL330C SDS23P53172 527 aa7.03□□□□□ -1.28
RPD3YNL330C HST4P53688 370 aa7.03□□□□□ -1.28
RPD3YNL330C MET32Q12041 191 aa7.03□□□□□ -1.28
RPD3YNL330C CYC3P06182 269 aa7.02□□□□□ -1.28
RPD3YNL330C DDI2P0CH63 225 aa7.02□□□□□ -1.28
RPD3YNL330C DDI3P0CH64 225 aa7.02□□□□□ -1.28
RPD3YNL330C HEM13P11353 328 aaKnown RBP7.02□□□□□ -1.28
RPD3YNL330C MRPL31P14063 131 aaPredicted RBP7.02□□□□□ -1.28
RPD3YNL330C DAL80P26343 269 aa7.02□□□□□ -1.28
RPD3YNL330C UTR5P32630 166 aa7.02□□□□□ -1.28
RPD3YNL330C ADH5P38113 351 aaKnown RBP7.02□□□□□ -1.28
RPD3YNL330C CTR2P38865 189 aa7.02□□□□□ -1.28
RPD3YNL330C YER121WP40076 114 aa7.02□□□□□ -1.28
RPD3YNL330C HUA1P40325 198 aa7.02□□□□□ -1.28
RPD3YNL330C HAC1P41546 238 aa7.02□□□□□ -1.28
RPD3YNL330C YIP1P53039 248 aa7.02□□□□□ -1.28
RPD3YNL330C ATG33Q06485 197 aa7.02□□□□□ -1.28
RPD3YNL330C YDL218WQ07629 317 aa7.02□□□□□ -1.28
RPD3YNL330C CSI2Q08054 341 aa7.02□□□□□ -1.28
RPD3YNL330C YPL162CQ12042 273 aa7.02□□□□□ -1.28
RPD3YNL330C RKI1Q12189 258 aa7.02□□□□□ -1.28
RPD3YNL330C YDL009CQ12210 107 aa7.02□□□□□ -1.28
RPD3YNL330C AYT1Q12226 474 aa7.02□□□□□ -1.28
RPD3YNL330C WIP1Q2V2P8 89 aa7.02□□□□□ -1.28
RPD3YNL330C RPL23AP0CX41 137 aaKnown RBP7.01□□□□□ -1.29
RPD3YNL330C RPL23BP0CX42 137 aaKnown RBP7.01□□□□□ -1.29
RPD3YNL330C FZF1P32805 299 aa7.01□□□□□ -1.29
RPD3YNL330C RRT1P38192 103 aa7.01□□□□□ -1.29
RPD3YNL330C YFR045WP43617 309 aa7.01□□□□□ -1.29
RPD3YNL330C CWC27Q02770 301 aa7.01□□□□□ -1.29
RPD3YNL330C MIX17Q03667 156 aa7.01□□□□□ -1.29
RPD3YNL330C YDR215CQ12240 137 aa7.01□□□□□ -1.29
RPD3YNL330C HTB2P02294 131 aa7.01□□□□□ -1.29
RPD3YNL330C MDM10P18409 493 aa7.01□□□□□ -1.29
RPD3YNL330C FEN2P25621 512 aaKnown RBP7.01□□□□□ -1.29
RPD3YNL330C ECM14P38836 430 aa7.01□□□□□ -1.29
RPD3YNL330C YGL230CP53074 147 aa7.01□□□□□ -1.29
RPD3YNL330C YGR151CP53287 111 aa7.01□□□□□ -1.29
RPD3YNL330C ARC18Q05933 178 aaKnown RBP7.01□□□□□ -1.29
RPD3YNL330C FSF1Q12029 327 aaKnown RBP7.01□□□□□ -1.29
RPD3YNL330C IES6P32617 166 aa7□□□□□ -1.29
RPD3YNL330C TIR2P33890 251 aa7□□□□□ -1.29
RPD3YNL330C MTR2P34232 184 aaKnown RBP7□□□□□ -1.29
RPD3YNL330C YKR045CP36138 183 aa7□□□□□ -1.29
RPD3YNL330C PRS4P38063 326 aaPredicted RBP7□□□□□ -1.29
RPD3YNL330C ALG14P38242 237 aa7□□□□□ -1.29
RPD3YNL330C FYV4P38783 130 aaPredicted RBP7□□□□□ -1.29
RPD3YNL330C YJL163CP46996 555 aa7□□□□□ -1.29
RPD3YNL330C BRP1P53194 125 aa7□□□□□ -1.29
RPD3YNL330C DAD4P69851 72 aa7□□□□□ -1.29
RPD3YNL330C RXT3Q07458 294 aa7□□□□□ -1.29
RPD3YNL330C DAD1Q12248 94 aa7□□□□□ -1.29
RPD3YNL330C ADE8P04161 214 aa6.99□□□□□ -1.29
RPD3YNL330C SEC11P15367 167 aa6.99□□□□□ -1.29
RPD3YNL330C MRPL20P22354 195 aaPredicted RBP6.99□□□□□ -1.29
RPD3YNL330C GPI18P38211 433 aa6.99□□□□□ -1.29
RPD3YNL330C MSL1P40567 111 aaPredicted RBP6.99□□□□□ -1.29
RPD3YNL330C YJL213WP40896 331 aa6.99□□□□□ -1.29
RPD3YNL330C IRC25Q07951 179 aa6.99□□□□□ -1.29
RPD3YNL330C YLR050CQ12155 161 aaKnown RBP6.99□□□□□ -1.29
RPD3YNL330C TMA7Q3E764 64 aaKnown RBP6.99□□□□□ -1.29
RPD3YNL330C HTL1Q9URQ5 78 aa6.99□□□□□ -1.29
RPD3YNL330C YFL068WP0CX99 160 aa6.98□□□□□ -1.29
RPD3YNL330C YLL066W-AP0CY00 160 aa6.98□□□□□ -1.29
RPD3YNL330C YLL067W-AP0CY01 160 aa6.98□□□□□ -1.29
RPD3YNL330C YNL200CP40165 246 aaKnown RBP6.98□□□□□ -1.29
RPD3YNL330C YGR045CP53229 120 aa6.98□□□□□ -1.29
RPD3YNL330C UPS3Q04006 179 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms