RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W UPS3Q04006 179 aa2.29□□□□□ -2.04
CAF120YNL278W YMR082CQ04276 118 aa2.29□□□□□ -2.04
CAF120YNL278W FIT1Q04433 528 aa2.29□□□□□ -2.04
CAF120YNL278W YKL023C-AQ2V2P3 75 aa2.29□□□□□ -2.04
CAF120YNL278W YDL085C-AQ3E7B7 68 aaKnown RBP2.29□□□□□ -2.04
CAF120YNL278W UTP20P35194 2493 aaKnown RBP2.29□□□□□ -2.04
CAF120YNL278W YIL012WP40551 113 aa2.28□□□□□ -2.04
CAF120YNL278W YFL015CP43578 164 aa2.28□□□□□ -2.04
CAF120YNL278W YGR039WP53225 103 aa2.28□□□□□ -2.04
CAF120YNL278W DUG3P53871 357 aa2.28□□□□□ -2.04
CAF120YNL278W VPS71Q03433 280 aa2.28□□□□□ -2.04
CAF120YNL278W YDR215CQ12240 137 aa2.28□□□□□ -2.04
CAF120YNL278W NPC2Q12408 173 aa2.28□□□□□ -2.04
CAF120YNL278W YLR412C-AQ3E742 68 aa2.28□□□□□ -2.04
CAF120YNL278W RPS22BQ3E7Y3 130 aaKnown RBP2.28□□□□□ -2.04
CAF120YNL278W RPS14AP06367 137 aaKnown RBP2.28□□□□□ -2.04
CAF120YNL278W RPS14BP39516 138 aaKnown RBP2.28□□□□□ -2.04
CAF120YNL278W HPA3P39979 161 aa2.28□□□□□ -2.04
CAF120YNL278W SFT1P43682 97 aa2.28□□□□□ -2.04
CAF120YNL278W HST4P53688 370 aa2.28□□□□□ -2.04
CAF120YNL278W TRS23Q03784 219 aa2.28□□□□□ -2.04
CAF120YNL278W YPR098CQ06089 161 aa2.28□□□□□ -2.04
CAF120YNL278W YPR011CQ12251 326 aa2.28□□□□□ -2.04
CAF120YNL278W HUT1Q12520 339 aa2.28□□□□□ -2.04
CAF120YNL278W YNL277W-AQ3E7Z0 62 aa2.28□□□□□ -2.04
CAF120YNL278W KTI11Q3E840 82 aa2.28□□□□□ -2.04
CAF120YNL278W ANB1P19211 157 aa2.28□□□□□ -2.04
CAF120YNL278W TOS8P53147 276 aa2.28□□□□□ -2.04
CAF120YNL278W INP1Q03694 420 aa2.28□□□□□ -2.04
CAF120YNL278W IRC19Q07843 230 aa2.28□□□□□ -2.04
CAF120YNL278W SME1Q12330 94 aaPredicted RBP2.28□□□□□ -2.04
CAF120YNL278W YCR100CP25606 316 aa2.27□□□□□ -2.05
CAF120YNL278W HTD2P38790 280 aaKnown RBP2.27□□□□□ -2.05
CAF120YNL278W YPL073CP40323 161 aa2.27□□□□□ -2.05
CAF120YNL278W TIR3P40552 269 aa2.27□□□□□ -2.05
CAF120YNL278W CAB4P53332 305 aa2.27□□□□□ -2.05
CAF120YNL278W ATP23P53722 227 aa2.27□□□□□ -2.05
CAF120YNL278W PGA1P53896 198 aa2.27□□□□□ -2.05
CAF120YNL278W FCF1Q05498 189 aaPredicted RBP2.27□□□□□ -2.05
CAF120YNL278W NAT3Q06504 195 aa2.27□□□□□ -2.05
CAF120YNL278W YLR042CQ07990 161 aa2.27□□□□□ -2.05
CAF120YNL278W YDL009CQ12210 107 aa2.27□□□□□ -2.05
CAF120YNL278W SWM1Q12379 170 aa2.27□□□□□ -2.05
CAF120YNL278W IRA1P18963 3092 aa2.27□□□□□ -2.05
CAF120YNL278W YBR056W-AI2HB52 66 aa2.27□□□□□ -2.05
CAF120YNL278W HMRA1P0CY11 126 aa2.27□□□□□ -2.05
CAF120YNL278W HAP3P13434 144 aa2.27□□□□□ -2.05
CAF120YNL278W QCR9P22289 66 aa2.27□□□□□ -2.05
CAF120YNL278W YKR070WP36151 352 aaKnown RBP2.27□□□□□ -2.05
CAF120YNL278W SNO3P43544 222 aa2.27□□□□□ -2.05
CAF120YNL278W AIM25P47140 327 aa2.27□□□□□ -2.05
CAF120YNL278W TTI2P47168 421 aa2.27□□□□□ -2.05
CAF120YNL278W BXI1P48558 297 aa2.27□□□□□ -2.05
CAF120YNL278W SNO2P53823 222 aa2.27□□□□□ -2.05
CAF120YNL278W SEN15Q04675 128 aa2.27□□□□□ -2.05
CAF120YNL278W SHH4Q06236 168 aa2.27□□□□□ -2.05
CAF120YNL278W GAT3Q07928 141 aa2.27□□□□□ -2.05
CAF120YNL278W YOR376WQ08900 122 aa2.27□□□□□ -2.05
CAF120YNL278W YGL258W-AQ3E740 77 aa2.27□□□□□ -2.05
CAF120YNL278W YBL112CQ3E7Y4 105 aa2.27□□□□□ -2.05
CAF120YNL278W VPS13Q07878 3144 aa2.27□□□□□ -2.05
CAF120YNL278W RPL7AP05737 244 aaKnown RBP2.26□□□□□ -2.05
CAF120YNL278W YPR170W-BP0C5R9 85 aa2.26□□□□□ -2.05
CAF120YNL278W ARF2P19146 181 aaKnown RBP2.26□□□□□ -2.05
CAF120YNL278W COX10P21592 462 aa2.26□□□□□ -2.05
CAF120YNL278W TIP1P27654 210 aaPredicted RBP2.26□□□□□ -2.05
CAF120YNL278W MST27P53176 234 aa2.26□□□□□ -2.05
CAF120YNL278W WSC2P53832 503 aa2.26□□□□□ -2.05
CAF120YNL278W YPL039WQ03080 316 aa2.26□□□□□ -2.05
CAF120YNL278W SCW10Q04951 389 aa2.26□□□□□ -2.05
CAF120YNL278W ATG5Q12380 294 aa2.26□□□□□ -2.05
CAF120YNL278W YHR214C-EQ8TGK0 99 aa2.26□□□□□ -2.05
CAF120YNL278W BRR2P32639 2163 aaKnown RBP2.26□□□□□ -2.05
CAF120YNL278W MDM10P18409 493 aa2.26□□□□□ -2.05
CAF120YNL278W ALK2P32789 676 aaPredicted RBP2.26□□□□□ -2.05
CAF120YNL278W SDH4P37298 181 aa2.26□□□□□ -2.05
CAF120YNL278W MST28P39552 234 aa2.26□□□□□ -2.05
CAF120YNL278W GON7P46984 123 aa2.26□□□□□ -2.05
CAF120YNL278W SMM1P53720 384 aaKnown RBP2.26□□□□□ -2.05
CAF120YNL278W IZH2Q12442 317 aa2.26□□□□□ -2.05
CAF120YNL278W SEC4P07560 215 aaKnown RBP2.26□□□□□ -2.05
CAF120YNL278W ARF1P11076 181 aaKnown RBP2.26□□□□□ -2.05
CAF120YNL278W MRPL20P22354 195 aaPredicted RBP2.26□□□□□ -2.05
CAF120YNL278W MRPL39P36533 70 aa2.26□□□□□ -2.05
CAF120YNL278W TEM1P38987 245 aa2.26□□□□□ -2.05
CAF120YNL278W MIM1Q08176 113 aa2.26□□□□□ -2.05
CAF120YNL278W ADH1P00330 348 aaKnown RBP2.25□□□□□ -2.05
CAF120YNL278W RPL30P14120 105 aaKnown RBP2.25□□□□□ -2.05
CAF120YNL278W YIL059CP40520 121 aa2.25□□□□□ -2.05
CAF120YNL278W YFR054CP43622 192 aa2.25□□□□□ -2.05
CAF120YNL278W YMR254CQ04838 102 aa2.25□□□□□ -2.05
CAF120YNL278W YHR139C-AO13536 103 aa2.25□□□□□ -2.05
CAF120YNL278W RPL15AP05748 204 aaKnown RBP2.25□□□□□ -2.05
CAF120YNL278W RAD6P06104 172 aa2.25□□□□□ -2.05
CAF120YNL278W MSI1P13712 422 aa2.25□□□□□ -2.05
CAF120YNL278W LSM2P38203 95 aaKnown RBP2.25□□□□□ -2.05
CAF120YNL278W YHR140WP38842 239 aa2.25□□□□□ -2.05
CAF120YNL278W YFR045WP43617 309 aa2.25□□□□□ -2.05
CAF120YNL278W RPL15BP54780 204 aaPredicted RBP2.25□□□□□ -2.05
CAF120YNL278W AVO2Q04749 426 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms