RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W VAR1P02381 398 aa1.49□□□□□ -2.17
CFT2YLR115W CPA1P07258 411 aaKnown RBP1.49□□□□□ -2.17
CFT2YLR115W UBC5P15732 148 aa1.49□□□□□ -2.17
CFT2YLR115W UTH1P36135 365 aa1.49□□□□□ -2.17
CFT2YLR115W RSM27P53305 110 aa1.49□□□□□ -2.17
CFT2YLR115W BUD25P85052 153 aa1.49□□□□□ -2.17
CFT2YLR115W RRT7Q07829 113 aa1.49□□□□□ -2.17
CFT2YLR115W HUT1Q12520 339 aa1.49□□□□□ -2.17
CFT2YLR115W RAD6P06104 172 aa1.49□□□□□ -2.17
CFT2YLR115W PEX4P29340 183 aa1.49□□□□□ -2.17
CFT2YLR115W CSE2P33308 149 aa1.49□□□□□ -2.17
CFT2YLR115W MSA2P36157 363 aa1.49□□□□□ -2.17
CFT2YLR115W CSH1P38287 376 aa1.49□□□□□ -2.17
CFT2YLR115W HTD2P38790 280 aaKnown RBP1.49□□□□□ -2.17
CFT2YLR115W YER181CP40097 107 aa1.49□□□□□ -2.17
CFT2YLR115W NSE4P43124 402 aa1.49□□□□□ -2.17
CFT2YLR115W GNA1P43577 159 aaPredicted RBP1.49□□□□□ -2.17
CFT2YLR115W YJR085CP47131 105 aaKnown RBP1.49□□□□□ -2.17
CFT2YLR115W PGU1P47180 361 aa1.49□□□□□ -2.17
CFT2YLR115W DSK2P48510 373 aa1.49□□□□□ -2.17
CFT2YLR115W EST3Q03096 181 aa1.49□□□□□ -2.17
CFT2YLR115W RCE1Q03530 315 aa1.49□□□□□ -2.17
CFT2YLR115W GPA2P10823 449 aa1.48□□□□□ -2.17
CFT2YLR115W RPB3P16370 318 aaKnown RBP1.48□□□□□ -2.17
CFT2YLR115W YER134CP40081 178 aa1.48□□□□□ -2.17
CFT2YLR115W YER135CP40082 130 aa1.48□□□□□ -2.17
CFT2YLR115W SKI6P46948 246 aaPredicted RBP1.48□□□□□ -2.17
CFT2YLR115W HAL1Q01766 294 aa1.48□□□□□ -2.17
CFT2YLR115W MRPS8Q03799 155 aa1.48□□□□□ -2.17
CFT2YLR115W IRC25Q07951 179 aa1.48□□□□□ -2.17
CFT2YLR115W NIP7Q08962 181 aaKnown RBP1.48□□□□□ -2.17
CFT2YLR115W IZH2Q12442 317 aa1.48□□□□□ -2.17
CFT2YLR115W FKS1P38631 1876 aaKnown RBP1.48□□□□□ -2.17
CFT2YLR115W YLR156WP0CE96 114 aa1.48□□□□□ -2.17
CFT2YLR115W YLR159WP0CE97 114 aa1.48□□□□□ -2.17
CFT2YLR115W YLR161WP0CE98 114 aa1.48□□□□□ -2.17
CFT2YLR115W PRE1P22141 198 aaKnown RBP1.48□□□□□ -2.17
CFT2YLR115W RCN1P36054 211 aa1.48□□□□□ -2.17
CFT2YLR115W SYS1P41544 203 aa1.48□□□□□ -2.17
CFT2YLR115W ELC1Q03071 99 aa1.48□□□□□ -2.17
CFT2YLR115W ISD11Q6Q560 94 aa1.48□□□□□ -2.17
CFT2YLR115W HAP3P13434 144 aa1.47□□□□□ -2.17
CFT2YLR115W SHE1P38200 338 aa1.47□□□□□ -2.17
CFT2YLR115W RPB11P38902 120 aa1.47□□□□□ -2.17
CFT2YLR115W ARC15P40518 154 aaRIP-Chip data1.47□□□□□ -2.17not detected
CFT2YLR115W GAT4P40569 121 aa1.47□□□□□ -2.17
CFT2YLR115W IGO1P53897 168 aa1.47□□□□□ -2.17
CFT2YLR115W YMR295CQ03559 197 aa1.47□□□□□ -2.17
CFT2YLR115W API2Q04413 109 aa1.47□□□□□ -2.17
CFT2YLR115W RNH202Q05635 350 aa1.47□□□□□ -2.17
CFT2YLR115W KEI1Q06346 221 aa1.47□□□□□ -2.17
CFT2YLR115W YOR097CQ12274 175 aaPredicted RBP1.47□□□□□ -2.17
CFT2YLR115W GTT2Q12390 233 aa1.47□□□□□ -2.17
CFT2YLR115W YPL229WQ99395 206 aa1.47□□□□□ -2.17
CFT2YLR115W YAR023CD6VPM8 179 aa1.47□□□□□ -2.17
CFT2YLR115W REP2P03872 296 aa1.47□□□□□ -2.17
CFT2YLR115W UTP30P36144 274 aaKnown RBP1.47□□□□□ -2.17
CFT2YLR115W SDH4P37298 181 aa1.47□□□□□ -2.17
CFT2YLR115W PHS1P40857 217 aa1.47□□□□□ -2.17
CFT2YLR115W IGD1P43598 195 aa1.47□□□□□ -2.17
CFT2YLR115W ATG18P43601 500 aa1.47□□□□□ -2.17
CFT2YLR115W RPA43P46669 326 aa1.47□□□□□ -2.17
CFT2YLR115W GON7P46984 123 aa1.47□□□□□ -2.17
CFT2YLR115W CAX4P53223 239 aa1.47□□□□□ -2.17
CFT2YLR115W YKR005CQ02203 525 aa1.47□□□□□ -2.17
CFT2YLR115W YPL039WQ03080 316 aa1.47□□□□□ -2.17
CFT2YLR115W YMR244WQ04018 355 aa1.47□□□□□ -2.17
CFT2YLR115W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
CFT2YLR115W YOL029CQ08187 201 aa1.47□□□□□ -2.17
CFT2YLR115W MCP1Q12106 302 aa1.47□□□□□ -2.17
CFT2YLR115W TIM22Q12328 207 aa1.47□□□□□ -2.17
CFT2YLR115W YHR139C-AO13536 103 aa1.46□□□□□ -2.18
CFT2YLR115W HSP26P15992 214 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
CFT2YLR115W HSP12P22943 109 aaKnown RBP1.46□□□□□ -2.18
CFT2YLR115W ZRT3P34240 503 aa1.46□□□□□ -2.18
CFT2YLR115W YKR070WP36151 352 aaKnown RBP1.46□□□□□ -2.18
CFT2YLR115W GPI18P38211 433 aa1.46□□□□□ -2.18
CFT2YLR115W ASP1P38986 381 aaPredicted RBP1.46□□□□□ -2.18
CFT2YLR115W IRC22P40006 225 aa1.46□□□□□ -2.18
CFT2YLR115W YJL218WP40892 196 aaKnown RBP1.46□□□□□ -2.18
CFT2YLR115W CUP9P41817 306 aa1.46□□□□□ -2.18
CFT2YLR115W FIT1Q04433 528 aa1.46□□□□□ -2.18
CFT2YLR115W TIR4Q12218 487 aaPredicted RBP1.46□□□□□ -2.18
CFT2YLR115W SMT3Q12306 101 aaKnown RBP1.46□□□□□ -2.18
CFT2YLR115W YBL112CQ3E7Y4 105 aa1.46□□□□□ -2.18
CFT2YLR115W DDP1Q99321 188 aaKnown RBP1.46□□□□□ -2.18
CFT2YLR115W SCM4P32564 187 aa1.46□□□□□ -2.18
CFT2YLR115W YFL019CP43576 117 aa1.46□□□□□ -2.18
CFT2YLR115W ATP19P81451 68 aa1.46□□□□□ -2.18
CFT2YLR115W TVP15Q03860 143 aa1.46□□□□□ -2.18
CFT2YLR115W TVP18Q04767 167 aa1.46□□□□□ -2.18
CFT2YLR115W SYM1Q06563 197 aa1.46□□□□□ -2.18
CFT2YLR115W YAL063C-AQ3E791 96 aa1.46□□□□□ -2.18
CFT2YLR115W FLO11P08640 1367 aa1.45□□□□□ -2.18
CFT2YLR115W RAS2P01120 322 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W MRS4P23500 304 aa1.45□□□□□ -2.18
CFT2YLR115W YCR099CP25657 155 aa1.45□□□□□ -2.18
CFT2YLR115W RPL14AP36105 138 aaKnown RBP1.45□□□□□ -2.18
CFT2YLR115W ECM34P38728 170 aa1.45□□□□□ -2.18
CFT2YLR115W RPL14BP38754 138 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms