RNA–Protein interactions for RNA: YJR083C

ACF4, Transcript of Protein of unknown function, yeast

Gene ACF4, Length 930 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ACF4	YJR083C	UBI4	P0CG63	381 aa	Known RBP	0.55	□□□□□ -2.32
ACF4	YJR083C	IPT1	P38954	527 aa		0.55	□□□□□ -2.32
ACF4	YJR083C	YGL193C	P53097	103 aa		0.55	□□□□□ -2.32
ACF4	YJR083C	ATG8	P38182	117 aa	RIP-Chip data	0.54	□□□□□ -2.32	not detected
ACF4	YJR083C	DLS1	P40366	167 aa		0.54	□□□□□ -2.32
ACF4	YJR083C	ORM1	P53224	222 aa		0.54	□□□□□ -2.32
ACF4	YJR083C	RCF2	P53721	224 aa		0.54	□□□□□ -2.32
ACF4	YJR083C	RPL30	P14120	105 aa	Known RBP	0.53	□□□□□ -2.32
ACF4	YJR083C	MRS4	P23500	304 aa		0.53	□□□□□ -2.32
ACF4	YJR083C	SAC3	P46674	1301 aa		0.53	□□□□□ -2.32
ACF4	YJR083C	HSL1	P34244	1518 aa		0.53	□□□□□ -2.33
ACF4	YJR083C	YER121W	P40076	114 aa		0.52	□□□□□ -2.33
ACF4	YJR083C	ATP19	P81451	68 aa		0.52	□□□□□ -2.33
ACF4	YJR083C	YPD1	Q07688	167 aa		0.52	□□□□□ -2.33
ACF4	YJR083C	RPL33A	P05744	107 aa	Known RBP	0.51	□□□□□ -2.33
ACF4	YJR083C	YMR141C	P40211	102 aa		0.51	□□□□□ -2.33
ACF4	YJR083C	IRC19	Q07843	230 aa		0.51	□□□□□ -2.33
ACF4	YJR083C	RFU1	Q08003	200 aa		0.51	□□□□□ -2.33
ACF4	YJR083C	CMC2	Q3E7A4	109 aa		0.51	□□□□□ -2.33
ACF4	YJR083C	CHD1	P32657	1468 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	PBI2	P0CT04	75 aa	Known RBP	0.5	□□□□□ -2.33
ACF4	YJR083C	SRP21	P32342	167 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	APQ12	P40532	138 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	FIP1	P45976	327 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	YJL009W	P47078	108 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	YPR153W	Q06537	140 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	GPI11	Q06636	219 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	RRT7	Q07829	113 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	RIB3	Q99258	208 aa		0.5	□□□□□ -2.33
ACF4	YJR083C	QCR2	P07257	368 aa		0.49	□□□□□ -2.33
ACF4	YJR083C	PEX34	P25584	144 aa		0.49	□□□□□ -2.33
ACF4	YJR083C	SEN15	Q04675	128 aa		0.49	□□□□□ -2.33
ACF4	YJR083C	IRC21	Q04772	201 aa		0.49	□□□□□ -2.33
ACF4	YJR083C	YPR202W	Q08993	238 aa		0.49	□□□□□ -2.33
ACF4	YJR083C	GPI2	P46961	280 aa		0.48	□□□□□ -2.33
ACF4	YJR083C	RPS28B	P0C0X0	67 aa	Known RBP	0.47	□□□□□ -2.33
ACF4	YJR083C	RPL43A	P0CX25	92 aa	Known RBP	0.47	□□□□□ -2.33
ACF4	YJR083C	RPL43B	P0CX26	92 aa		0.47	□□□□□ -2.33
ACF4	YJR083C	NHP6A	P11632	93 aa	Known RBP	0.47	□□□□□ -2.33
ACF4	YJR083C	SRL3	P36167	246 aa		0.47	□□□□□ -2.33
ACF4	YJR083C	SLM6	P38343	150 aa		0.47	□□□□□ -2.33
ACF4	YJR083C	YER181C	P40097	107 aa		0.47	□□□□□ -2.33
ACF4	YJR083C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.47	□□□□□ -2.33
ACF4	YJR083C	BUB2	P26448	306 aa	Predicted RBP	0.46	□□□□□ -2.34
ACF4	YJR083C	VMA10	P48836	114 aa	Known RBP	0.46	□□□□□ -2.34
ACF4	YJR083C	CDC39	P25655	2108 aa	Known RBP	0.46	□□□□□ -2.34
ACF4	YJR083C	PHO13	P19881	312 aa		0.45	□□□□□ -2.34
ACF4	YJR083C	MRPL24	P36525	258 aa	Predicted RBP	0.45	□□□□□ -2.34
ACF4	YJR083C	YHR140W	P38842	239 aa		0.45	□□□□□ -2.34
ACF4	YJR083C	EST3	Q03096	181 aa		0.45	□□□□□ -2.34
ACF4	YJR083C	AME1	P38313	324 aa		0.44	□□□□□ -2.34
ACF4	YJR083C	YJL218W	P40892	196 aa	Known RBP	0.44	□□□□□ -2.34
ACF4	YJR083C	HUT1	Q12520	339 aa		0.44	□□□□□ -2.34
ACF4	YJR083C	EFG1	Q3E705	233 aa	Known RBP	0.44	□□□□□ -2.34
ACF4	YJR083C	YLR307C-A	Q3E825	87 aa		0.44	□□□□□ -2.34
ACF4	YJR083C	SCS22	Q6Q595	175 aa		0.44	□□□□□ -2.34
ACF4	YJR083C	YGL014C-A	P0C5N1	53 aa		0.43	□□□□□ -2.34
ACF4	YJR083C	DIE2	P50076	525 aa		0.43	□□□□□ -2.34
ACF4	YJR083C	NSL1	Q12143	216 aa		0.43	□□□□□ -2.34
ACF4	YJR083C	MHF1	Q3E835	90 aa		0.43	□□□□□ -2.34
ACF4	YJR083C	COA6	Q3E846	104 aa		0.43	□□□□□ -2.34
ACF4	YJR083C	DDR48	P18899	430 aa	Known RBP	0.42	□□□□□ -2.34
ACF4	YJR083C	YLR157W-E	P0CF00	54 aa		0.41	□□□□□ -2.34
ACF4	YJR083C	DER1	P38307	211 aa		0.41	□□□□□ -2.34
ACF4	YJR083C	YMR122C	Q03879	124 aa		0.41	□□□□□ -2.34
ACF4	YJR083C	MVB12	P42939	101 aa		0.4	□□□□□ -2.35
ACF4	YJR083C	COX5B	P00425	151 aa		0.39	□□□□□ -2.35
ACF4	YJR083C	YNL019C	P53975	284 aa		0.39	□□□□□ -2.35
ACF4	YJR083C	KTI11	Q3E840	82 aa		0.39	□□□□□ -2.35
ACF4	YJR083C	HSP12	P22943	109 aa	Known RBP	0.38	□□□□□ -2.35
ACF4	YJR083C	LST8	P41318	303 aa		0.38	□□□□□ -2.35
ACF4	YJR083C	YOR034C-A	Q3E735	80 aa		0.38	□□□□□ -2.35
ACF4	YJR083C	FYV5	P25585	152 aa		0.37	□□□□□ -2.35
ACF4	YJR083C	YCL001W-A	P87012	153 aa		0.37	□□□□□ -2.35
ACF4	YJR083C	HUG1	Q6Q5K6	68 aa		0.37	□□□□□ -2.35
ACF4	YJR083C	FUN14	P18411	198 aa		0.36	□□□□□ -2.35
ACF4	YJR083C	ANB1	P19211	157 aa		0.36	□□□□□ -2.35
ACF4	YJR083C	RPS1B	P23248	255 aa	Known RBP	0.36	□□□□□ -2.35
ACF4	YJR083C	YMR321C	Q04898	105 aa		0.36	□□□□□ -2.35
ACF4	YJR083C	COA4	Q05809	96 aa		0.36	□□□□□ -2.35
ACF4	YJR083C	FIT3	Q08907	204 aa		0.36	□□□□□ -2.35
ACF4	YJR083C	UBR1	P19812	1950 aa		0.36	□□□□□ -2.35
ACF4	YJR083C	YHR213W	P0CI67	198 aa		0.35	□□□□□ -2.35
ACF4	YJR083C	IPI1	P38803	334 aa	Predicted RBP	0.35	□□□□□ -2.35
ACF4	YJR083C	RAF1	Q06891	181 aa		0.35	□□□□□ -2.35
ACF4	YJR083C	NMT1	P14743	455 aa		0.34	□□□□□ -2.36
ACF4	YJR083C	FIG1	P38224	298 aa		0.34	□□□□□ -2.36
ACF4	YJR083C	PHB1	P40961	287 aa		0.34	□□□□□ -2.36
ACF4	YJR083C	SOM1	Q05676	74 aa		0.34	□□□□□ -2.36
ACF4	YJR083C	NAT5	Q08689	176 aa		0.34	□□□□□ -2.36
ACF4	YJR083C	RAV2	Q03956	351 aa		0.33	□□□□□ -2.36
ACF4	YJR083C	DDP1	Q99321	188 aa	Known RBP	0.33	□□□□□ -2.36
ACF4	YJR083C	SFT2	P38166	215 aa		0.32	□□□□□ -2.36
ACF4	YJR083C	PFY1	P07274	126 aa		0.31	□□□□□ -2.36
ACF4	YJR083C	YGR201C	P42936	225 aa		0.31	□□□□□ -2.36
ACF4	YJR083C	LSM1	P47017	172 aa	Known RBP	0.31	□□□□□ -2.36
ACF4	YJR083C	LSM8	P47093	109 aa	Known RBP	0.31	□□□□□ -2.36
ACF4	YJR083C	EMC4	P53073	190 aa		0.31	□□□□□ -2.36
ACF4	YJR083C	PKR1	Q03880	122 aa	Known RBP	0.31	□□□□□ -2.36
ACF4	YJR083C	PET20	Q99373	253 aa		0.31	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms