RNA–Protein interactions for RNA: YIL135C

VHS2, Transcript of Regulator of septin dynamics, yeast

Gene VHS2, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHS2	YIL135C	RCE1	Q03530	315 aa		4.11	□□□□□ -1.75
VHS2	YIL135C	FIT3	Q08907	204 aa		4.11	□□□□□ -1.75
VHS2	YIL135C	YPL162C	Q12042	273 aa		4.11	□□□□□ -1.75
VHS2	YIL135C	TIR4	Q12218	487 aa	Predicted RBP	4.11	□□□□□ -1.75
VHS2	YIL135C	ATG5	Q12380	294 aa		4.11	□□□□□ -1.75
VHS2	YIL135C	HTL1	Q9URQ5	78 aa		4.11	□□□□□ -1.75
VHS2	YIL135C	YPR170W-B	P0C5R9	85 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	CSE2	P33308	149 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	SFT2	P38166	215 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	GGC1	P38988	300 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	YAR029W	P39549	74 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	CDC1	P40986	491 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	CUP9	P41817	306 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	YGR050C	P53231	118 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	AAH1	P53909	347 aa		4.1	□□□□□ -1.75
VHS2	YIL135C	PAI3	P01094	68 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	INO4	P13902	151 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
VHS2	YIL135C	TIM17	P39515	158 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	CCS1	P40202	249 aa	Known RBP	4.09	□□□□□ -1.75
VHS2	YIL135C	AVT7	P40501	490 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	PHS1	P40857	217 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	ERG25	P53045	309 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	YMR082C	Q04276	118 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	YMR090W	Q04304	227 aa	Known RBP	4.09	□□□□□ -1.75
VHS2	YIL135C	MSA1	Q08471	629 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	COA6	Q3E846	104 aa		4.09	□□□□□ -1.75
VHS2	YIL135C	MSW1	P04803	379 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	MRS4	P23500	304 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YCR006C	P25350	157 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	AHT1	P29589	182 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	VMA11	P32842	164 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YCR041W	P37265	110 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	SWM2	P40342	146 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	GAT4	P40569	121 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	EMC4	P53073	190 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YGL193C	P53097	103 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	CLD1	P53264	445 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	ERV29	P53337	310 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YPL039W	Q03080	316 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YOR292C	Q08743	309 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	TIM18	Q08749	192 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YDR029W	Q12111	104 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	DDP1	Q99321	188 aa	Known RBP	4.08	□□□□□ -1.76
VHS2	YIL135C	RIF1	P29539	1916 aa		4.08	□□□□□ -1.76
VHS2	YIL135C	YBR056W-A	I2HB52	66 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	YMR316C-A	I2HB70	103 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	PAM17	P36147	197 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	SHE1	P38200	338 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	MPM1	P40364	252 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	YNL234W	P53857	426 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	SRL1	Q08673	210 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	MED11	Q99278	115 aa		4.07	□□□□□ -1.76
VHS2	YIL135C	ECM12	O13529	151 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	YHR139C-A	O13536	103 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	YGL010W	P25338	174 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	LDB16	P25587	256 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	TMA19	P35691	167 aa	Known RBP	4.06	□□□□□ -1.76
VHS2	YIL135C	PET8	P38921	284 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	YJL218W	P40892	196 aa	Known RBP	4.06	□□□□□ -1.76
VHS2	YIL135C	YFL065C	P43539	102 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	NRM1	P53718	249 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	CUE4	Q04201	117 aa	Predicted RBP	4.06	□□□□□ -1.76
VHS2	YIL135C	SEN15	Q04675	128 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	YPR203W	Q08994	102 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	YDL211C	Q12121	372 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	YOS1	Q3E834	85 aa		4.06	□□□□□ -1.76
VHS2	YIL135C	RPL15A	P05748	204 aa	Known RBP	4.05	□□□□□ -1.76
VHS2	YIL135C	HSP12	P22943	109 aa	Known RBP	4.05	□□□□□ -1.76
VHS2	YIL135C	UTH1	P36135	365 aa		4.05	□□□□□ -1.76
VHS2	YIL135C	IRC22	P40006	225 aa		4.05	□□□□□ -1.76
VHS2	YIL135C	TPC1	P53257	314 aa		4.05	□□□□□ -1.76
VHS2	YIL135C	YMR252C	Q04814	134 aa		4.05	□□□□□ -1.76
VHS2	YIL135C	RAF1	Q06891	181 aa		4.05	□□□□□ -1.76
VHS2	YIL135C	KSH1	Q8TGJ3	72 aa		4.05	□□□□□ -1.76
VHS2	YIL135C	YER145C-A	A0A023PYF4	145 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	TRP1	P00912	224 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	YAR066W	P0CX18	203 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	YHR214W	P0CX19	203 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	YCR043C	P25361	127 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	YCR099C	P25657	155 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	MRPL11	P36521	249 aa	Predicted RBP	4.04	□□□□□ -1.76
VHS2	YIL135C	YER134C	P40081	178 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	SMD1	Q02260	146 aa	Predicted RBP	4.04	□□□□□ -1.76
VHS2	YIL135C	YPR174C	Q06616	221 aa	Predicted RBP	4.04	□□□□□ -1.76
VHS2	YIL135C	TDA8	Q6B2U8	126 aa		4.04	□□□□□ -1.76
VHS2	YIL135C	HEM4	P06174	275 aa		4.03	□□□□□ -1.76
VHS2	YIL135C	RPL43A	P0CX25	92 aa	Known RBP	4.03	□□□□□ -1.76
VHS2	YIL135C	RPL43B	P0CX26	92 aa		4.03	□□□□□ -1.76
VHS2	YIL135C	RPL42A	P0CX27	106 aa	Known RBP	4.03	□□□□□ -1.76
VHS2	YIL135C	RPL42B	P0CX28	106 aa	Known RBP	4.03	□□□□□ -1.76
VHS2	YIL135C	MSL1	P40567	111 aa	Predicted RBP	4.03	□□□□□ -1.76
VHS2	YIL135C	EST3	Q03096	181 aa		4.03	□□□□□ -1.76
VHS2	YIL135C	HRT1	Q08273	121 aa		4.03	□□□□□ -1.76
VHS2	YIL135C	PRM3	Q08931	133 aa		4.03	□□□□□ -1.76
VHS2	YIL135C	YPL245W	Q12179	454 aa	Known RBP	4.03	□□□□□ -1.76
VHS2	YIL135C	LAA1	P39526	2014 aa		4.03	□□□□□ -1.76
VHS2	YIL135C	RPL16A	P26784	199 aa	Known RBP	4.02	□□□□□ -1.77
VHS2	YIL135C	NSG1	P38837	291 aa		4.02	□□□□□ -1.77
VHS2	YIL135C	SPO73	P40031	143 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 183.7 ms