RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	MPC3	P53311	146 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	YKR005C	Q02203	525 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	VPS28	Q02767	242 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	YMR295C	Q03559	197 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	SLO1	Q3E784	85 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	SEN1	Q00416	2231 aa	Known RBP	3.66	□□□□□ -1.82
LCB2	YDR062W	LAA1	P39526	2014 aa		3.66	□□□□□ -1.82
LCB2	YDR062W	YER084W	P40057	128 aa		3.66	□□□□□ -1.82
LCB2	YDR062W	CUP9	P41817	306 aa		3.66	□□□□□ -1.82
LCB2	YDR062W	YGR219W	P53307	113 aa		3.66	□□□□□ -1.82
LCB2	YDR062W	FEX1	Q08913	375 aa		3.66	□□□□□ -1.82
LCB2	YDR062W	FEX2	Q08991	375 aa		3.66	□□□□□ -1.82
LCB2	YDR062W	RPL40A	P0CH08	128 aa	Known RBP	3.65	□□□□□ -1.82
LCB2	YDR062W	RPL40B	P0CH09	128 aa	Known RBP	3.65	□□□□□ -1.82
LCB2	YDR062W	SPT14	P32363	452 aa		3.65	□□□□□ -1.82
LCB2	YDR062W	SPC25	P40014	221 aa		3.65	□□□□□ -1.82
LCB2	YDR062W	CGI121	Q03705	181 aa	Known RBP	3.65	□□□□□ -1.82
LCB2	YDR062W	FRQ1	Q06389	190 aa		3.65	□□□□□ -1.82
LCB2	YDR062W	FSF1	Q12029	327 aa	Known RBP	3.65	□□□□□ -1.82
LCB2	YDR062W	ATP20	Q12233	115 aa		3.65	□□□□□ -1.82
LCB2	YDR062W	Q0144	Q9ZZW2	109 aa		3.65	□□□□□ -1.82
LCB2	YDR062W	RPS20	P38701	121 aa	Known RBP	3.65	□□□□□ -1.83
LCB2	YDR062W	GPI2	P46961	280 aa		3.65	□□□□□ -1.83
LCB2	YDR062W	APS3	P47064	194 aa		3.65	□□□□□ -1.83
LCB2	YDR062W	SLM2	P53955	656 aa		3.65	□□□□□ -1.83
LCB2	YDR062W	SDH7	Q04401	133 aa		3.65	□□□□□ -1.83
LCB2	YDR062W	CNL1	Q06333	122 aa		3.65	□□□□□ -1.83
LCB2	YDR062W	FMP27	Q06179	2628 aa		3.65	□□□□□ -1.83
LCB2	YDR062W	TEL1	P38110	2787 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	HSP30	P25619	332 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	SRP21	P32342	167 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	RPS1A	P33442	255 aa	Known RBP	3.64	□□□□□ -1.83
LCB2	YDR062W	YET1	P35723	206 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	HTD2	P38790	280 aa	Known RBP	3.64	□□□□□ -1.83
LCB2	YDR062W	YJL218W	P40892	196 aa	Known RBP	3.64	□□□□□ -1.83
LCB2	YDR062W	YDR391C	Q04170	232 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	SCW10	Q04951	389 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	SYM1	Q06563	197 aa		3.64	□□□□□ -1.83
LCB2	YDR062W	BEM2	P39960	2167 aa	Known RBP	3.63	□□□□□ -1.83
LCB2	YDR062W	RAD6	P06104	172 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	PHO13	P19881	312 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	SHH3	Q04487	196 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	YMR253C	Q04835	414 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	SPC3	Q12133	184 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	MSB2	P32334	1306 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	NUM1	Q00402	2748 aa		3.63	□□□□□ -1.83
LCB2	YDR062W	YEL028W	P39989	153 aa		3.62	□□□□□ -1.83
LCB2	YDR062W	RPL33B	P41056	107 aa	Known RBP	3.62	□□□□□ -1.83
LCB2	YDR062W	RPL26A	P05743	127 aa	Known RBP	3.62	□□□□□ -1.83
LCB2	YDR062W	FZF1	P32805	299 aa		3.62	□□□□□ -1.83
LCB2	YDR062W	MRPL24	P36525	258 aa	Predicted RBP	3.62	□□□□□ -1.83
LCB2	YDR062W	RPL26B	P53221	127 aa	Known RBP	3.62	□□□□□ -1.83
LCB2	YDR062W	YNR077C	P53758	84 aa		3.62	□□□□□ -1.83
LCB2	YDR062W	FCY1	Q12178	158 aa		3.62	□□□□□ -1.83
LCB2	YDR062W	SOD1	P00445	154 aa	Known RBP	3.61	□□□□□ -1.83
LCB2	YDR062W	MRP49	P32388	137 aa		3.61	□□□□□ -1.83
LCB2	YDR062W	PAM17	P36147	197 aa		3.61	□□□□□ -1.83
LCB2	YDR062W	RRT1	P38192	103 aa		3.61	□□□□□ -1.83
LCB2	YDR062W	PRP11	Q07350	266 aa	Predicted RBP	3.61	□□□□□ -1.83
LCB2	YDR062W	KRE1	P17260	313 aa		3.6	□□□□□ -1.83
LCB2	YDR062W	FMP49	A0A023PZB3	126 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	RPL22A	P05749	121 aa	Known RBP	3.59	□□□□□ -1.83
LCB2	YDR062W	CUP1-1	P0CX80	61 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	CUP1-2	P0CX81	61 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	PHO85	P17157	305 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	AGA2	P32781	87 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	SUI1	P32911	108 aa	Known RBP	3.59	□□□□□ -1.83
LCB2	YDR062W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.83	not detected
LCB2	YDR062W	SHB17	P36136	271 aa	Known RBP	3.59	□□□□□ -1.83
LCB2	YDR062W	VMA7	P39111	118 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	YNR062C	P53748	327 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	ATG40	Q99325	256 aa		3.59	□□□□□ -1.83
LCB2	YDR062W	YHR140W	P38842	239 aa		3.59	□□□□□ -1.84
LCB2	YDR062W	YER135C	P40082	130 aa		3.59	□□□□□ -1.84
LCB2	YDR062W	CIS3	P47001	227 aa		3.59	□□□□□ -1.84
LCB2	YDR062W	YDR102C	Q03864	110 aa		3.59	□□□□□ -1.84
LCB2	YDR062W	IRC23	Q08416	157 aa		3.59	□□□□□ -1.84
LCB2	YDR062W	FPR1	P20081	114 aa	Known RBP	3.58	□□□□□ -1.84
LCB2	YDR062W	TRS20	P38334	175 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	RIO2	P40160	425 aa	Known RBP	3.58	□□□□□ -1.84
LCB2	YDR062W	TIR3	P40552	269 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	BOL2	P53082	120 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	YNL033W	P53964	284 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	YNL019C	P53975	284 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	EST3	Q03096	181 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	YNL277W-A	Q3E7Z0	62 aa		3.58	□□□□□ -1.84
LCB2	YDR062W	HSP12	P22943	109 aa	Known RBP	3.57	□□□□□ -1.84
LCB2	YDR062W	RPS1B	P23248	255 aa	Known RBP	3.57	□□□□□ -1.84
LCB2	YDR062W	AHT1	P29589	182 aa		3.57	□□□□□ -1.84
LCB2	YDR062W	AYR1	P40471	297 aa		3.57	□□□□□ -1.84
LCB2	YDR062W	HYM1	P32464	399 aa		3.56	□□□□□ -1.84
LCB2	YDR062W	YEL073C	P39974	107 aa		3.56	□□□□□ -1.84
LCB2	YDR062W	YJL027C	P47063	138 aa	Predicted RBP	3.56	□□□□□ -1.84
LCB2	YDR062W	YJR146W	P47174	117 aa		3.56	□□□□□ -1.84
LCB2	YDR062W	YGR017W	P53210	297 aa		3.56	□□□□□ -1.84
LCB2	YDR062W	YNR064C	P53750	290 aa		3.56	□□□□□ -1.84
LCB2	YDR062W	BUD25	P85052	153 aa		3.56	□□□□□ -1.84
LCB2	YDR062W	ARL3	Q02804	198 aa		3.55	□□□□□ -1.84
LCB2	YDR062W	MZM1	Q03429	123 aa	Predicted RBP	3.55	□□□□□ -1.84
LCB2	YDR062W	LIP1	Q03579	150 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms