RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C TOM7P53507 60 aa3.16□□□□□ -1.9
RPO21YDL140C YGR240C-AQ3E786 66 aa3.16□□□□□ -1.9
RPO21YDL140C RPS31P05759 152 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C PIS1P06197 220 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C GSP1P32835 219 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C MBA1P38300 278 aa3.16□□□□□ -1.9
RPO21YDL140C CTR2P38865 189 aa3.16□□□□□ -1.9
RPO21YDL140C PET100P38958 111 aa3.16□□□□□ -1.9
RPO21YDL140C MST28P39552 234 aa3.16□□□□□ -1.9
RPO21YDL140C SYG1P40528 902 aa3.16□□□□□ -1.9
RPO21YDL140C YPL247CQ12523 523 aa3.16□□□□□ -1.9
RPO21YDL140C YLL053CP0CD98 152 aa3.15□□□□□ -1.9
RPO21YDL140C MRS3P10566 314 aa3.15□□□□□ -1.9
RPO21YDL140C FLO10P36170 1169 aa3.15□□□□□ -1.9
RPO21YDL140C DER1P38307 211 aa3.15□□□□□ -1.9
RPO21YDL140C AME1P38313 324 aa3.15□□□□□ -1.9
RPO21YDL140C YGR219WP53307 113 aa3.15□□□□□ -1.9
RPO21YDL140C CTR3Q06686 241 aa3.15□□□□□ -1.9
RPO21YDL140C MED7Q08278 222 aa3.15□□□□□ -1.9
RPO21YDL140C HTD2P38790 280 aaKnown RBP3.15□□□□□ -1.91
RPO21YDL140C GPI2P46961 280 aa3.15□□□□□ -1.91
RPO21YDL140C AVO2Q04749 426 aa3.15□□□□□ -1.91
RPO21YDL140C YPR096CO13587 100 aa3.15□□□□□ -1.91
RPO21YDL140C TIP1P27654 210 aaPredicted RBP3.15□□□□□ -1.91
RPO21YDL140C BDH1P39714 382 aa3.15□□□□□ -1.91
RPO21YDL140C PEX27Q08580 376 aa3.15□□□□□ -1.91
RPO21YDL140C YBL029C-AQ3E756 94 aa3.15□□□□□ -1.91
RPO21YDL140C YOX1P34161 385 aa3.15□□□□□ -1.91
RPO21YDL140C YBL059WP34224 193 aa3.15□□□□□ -1.91
RPO21YDL140C SFT2P38166 215 aa3.15□□□□□ -1.91
RPO21YDL140C SMD3P43321 101 aaKnown RBP3.15□□□□□ -1.91
RPO21YDL140C YGL204CP53089 101 aa3.15□□□□□ -1.91
RPO21YDL140C YDR034C-AP0C289 58 aa3.14□□□□□ -1.91
RPO21YDL140C RPS11AP0CX47 156 aaKnown RBP3.14□□□□□ -1.91
RPO21YDL140C RPS11BP0CX48 156 aaKnown RBP3.14□□□□□ -1.91
RPO21YDL140C RIB4P50861 169 aaPredicted RBP3.14□□□□□ -1.91
RPO21YDL140C YDR366CP87287 132 aa3.14□□□□□ -1.91
RPO21YDL140C MRX11Q03079 207 aa3.14□□□□□ -1.91
RPO21YDL140C SNO1Q03144 224 aa3.14□□□□□ -1.91
RPO21YDL140C YPR015CQ12531 247 aa3.14□□□□□ -1.91
RPO21YDL140C TRS20P38334 175 aa3.14□□□□□ -1.91
RPO21YDL140C YGL118CP53132 145 aa3.14□□□□□ -1.91
RPO21YDL140C TIM18Q08749 192 aa3.14□□□□□ -1.91
RPO21YDL140C RPL31AP0C2H8 113 aaKnown RBP3.14□□□□□ -1.91
RPO21YDL140C UBI4P0CG63 381 aaKnown RBP3.14□□□□□ -1.91
RPO21YDL140C VMA11P32842 164 aa3.14□□□□□ -1.91
RPO21YDL140C WSC4P38739 605 aa3.14□□□□□ -1.91
RPO21YDL140C YGL230CP53074 147 aa3.14□□□□□ -1.91
RPO21YDL140C YGK3Q12222 375 aaPredicted RBP3.14□□□□□ -1.91
RPO21YDL140C COA2Q3E823 68 aa3.14□□□□□ -1.91
RPO21YDL140C ECM12O13529 151 aa3.14□□□□□ -1.91
RPO21YDL140C MIT1P40002 666 aa3.14□□□□□ -1.91
RPO21YDL140C NRG1Q03125 231 aa3.14□□□□□ -1.91
RPO21YDL140C MRPL23Q12487 163 aaPredicted RBP3.14□□□□□ -1.91
RPO21YDL140C YBL112CQ3E7Y4 105 aa3.14□□□□□ -1.91
RPO21YDL140C TY1B-DR3Q99231 1755 aa3.13□□□□□ -1.91
RPO21YDL140C MRPL28P36527 147 aa3.13□□□□□ -1.91
RPO21YDL140C RIB1P38066 345 aa3.13□□□□□ -1.91
RPO21YDL140C YNL195CP40168 261 aa3.13□□□□□ -1.91
RPO21YDL140C YJR096WP47137 282 aa3.13□□□□□ -1.91
RPO21YDL140C CHO1P08456 276 aa3.13□□□□□ -1.91
RPO21YDL140C RPL12AP0CX53 165 aaKnown RBP3.13□□□□□ -1.91
RPO21YDL140C RPL12BP0CX54 165 aa3.13□□□□□ -1.91
RPO21YDL140C DBP2P24783 546 aaKnown RBP3.13□□□□□ -1.91
RPO21YDL140C PPQ1P32945 549 aa3.13□□□□□ -1.91
RPO21YDL140C FSF1Q12029 327 aaKnown RBP3.13□□□□□ -1.91
RPO21YDL140C GPX2P38143 162 aa3.13□□□□□ -1.91
RPO21YDL140C ECM23Q02710 187 aa3.13□□□□□ -1.91
RPO21YDL140C SHH3Q04487 196 aa3.13□□□□□ -1.91
RPO21YDL140C FAS2P19097 1887 aaKnown RBP3.13□□□□□ -1.91
RPO21YDL140C YCR001WP25347 104 aa3.13□□□□□ -1.91
RPO21YDL140C PCL2P25693 308 aa3.13□□□□□ -1.91
RPO21YDL140C YPT53P36019 220 aa3.13□□□□□ -1.91
RPO21YDL140C GTT1P40582 234 aa3.13□□□□□ -1.91
RPO21YDL140C LST8P41318 303 aa3.13□□□□□ -1.91
RPO21YDL140C YGL117WP53133 265 aa3.13□□□□□ -1.91
RPO21YDL140C ANT1Q06497 328 aa3.13□□□□□ -1.91
RPO21YDL140C MPP6P53725 186 aaPredicted RBP3.12□□□□□ -1.91
RPO21YDL140C RPL27AP0C2H6 136 aaKnown RBP3.12□□□□□ -1.91
RPO21YDL140C PTH1P38876 190 aaKnown RBP3.12□□□□□ -1.91
RPO21YDL140C YTH1Q06102 208 aaPredicted RBP3.12□□□□□ -1.91
RPO21YDL140C CMC4Q3E7A9 73 aa3.12□□□□□ -1.91
RPO21YDL140C SHB17P36136 271 aaKnown RBP3.12□□□□□ -1.91
RPO21YDL140C ERG28P40030 148 aa3.12□□□□□ -1.91
RPO21YDL140C YER076CP40049 302 aa3.12□□□□□ -1.91
RPO21YDL140C Q0297Q9ZZV8 51 aa3.12□□□□□ -1.91
RPO21YDL140C ATP6P00854 259 aa3.12□□□□□ -1.91
RPO21YDL140C LDS1P31379 325 aa3.12□□□□□ -1.91
RPO21YDL140C YNK1P36010 153 aaKnown RBP3.12□□□□□ -1.91
RPO21YDL140C YHR130CP38834 111 aa3.12□□□□□ -1.91
RPO21YDL140C YGL262WP53054 175 aa3.12□□□□□ -1.91
RPO21YDL140C CYC7P00045 113 aa3.11□□□□□ -1.91
RPO21YDL140C ASP1P38986 381 aaPredicted RBP3.11□□□□□ -1.91
RPO21YDL140C BOR1P53838 576 aa3.11□□□□□ -1.91
RPO21YDL140C ARC18Q05933 178 aaKnown RBP3.11□□□□□ -1.91
RPO21YDL140C POL2P21951 2222 aaKnown RBP3.11□□□□□ -1.91
RPO21YDL140C POR1P04840 283 aaKnown RBP3.11□□□□□ -1.91
RPO21YDL140C CNB1P25296 175 aa3.11□□□□□ -1.91
RPO21YDL140C MRPL35Q06678 367 aa3.11□□□□□ -1.91
RPO21YDL140C TIM22Q12328 207 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms