RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C YDL157CQ12082 118 aa4.79□□□□□ -1.64
MDH3YDL078C CYC3P06182 269 aa4.78□□□□□ -1.64
MDH3YDL078C ADK1P07170 222 aaKnown RBP4.78□□□□□ -1.64
MDH3YDL078C MIG1P27705 504 aa4.78□□□□□ -1.64
MDH3YDL078C IES6P32617 166 aa4.78□□□□□ -1.64
MDH3YDL078C VMA11P32842 164 aa4.78□□□□□ -1.64
MDH3YDL078C SOR1P35497 357 aaKnown RBP4.78□□□□□ -1.64
MDH3YDL078C CMC1P36064 111 aa4.78□□□□□ -1.64
MDH3YDL078C CDC40P40968 455 aaPredicted RBP4.78□□□□□ -1.64
MDH3YDL078C YCH1P42937 148 aa4.78□□□□□ -1.64
MDH3YDL078C POS5Q06892 414 aa4.78□□□□□ -1.64
MDH3YDL078C SOR2Q07786 357 aa4.78□□□□□ -1.64
MDH3YDL078C IRC25Q07951 179 aa4.78□□□□□ -1.64
MDH3YDL078C ISD11Q6Q560 94 aa4.78□□□□□ -1.64
MDH3YDL078C ADH1P00330 348 aaKnown RBP4.77□□□□□ -1.65
MDH3YDL078C INO4P13902 151 aa4.77□□□□□ -1.65
MDH3YDL078C ERG24P32462 438 aaKnown RBP4.77□□□□□ -1.65
MDH3YDL078C RAD23P32628 398 aaKnown RBP4.77□□□□□ -1.65
MDH3YDL078C TIR2P33890 251 aa4.77□□□□□ -1.65
MDH3YDL078C ECM33P38248 429 aaKnown RBP4.77□□□□□ -1.65
MDH3YDL078C UMP1P38293 148 aa4.77□□□□□ -1.65
MDH3YDL078C PRE5P40302 234 aaKnown RBP4.77□□□□□ -1.65
MDH3YDL078C GON7P46984 123 aa4.77□□□□□ -1.65
MDH3YDL078C ATG27P46989 271 aa4.77□□□□□ -1.65
MDH3YDL078C RIM9Q04734 239 aa4.77□□□□□ -1.65
MDH3YDL078C LIP2Q06005 328 aa4.77□□□□□ -1.65
MDH3YDL078C PAM18Q07914 168 aa4.77□□□□□ -1.65
MDH3YDL078C YDL009CQ12210 107 aa4.77□□□□□ -1.65
MDH3YDL078C POM34Q12445 299 aa4.77□□□□□ -1.65
MDH3YDL078C YLR146W-AQ2V2P1 62 aa4.77□□□□□ -1.65
MDH3YDL078C YLR363W-AQ3E747 85 aa4.77□□□□□ -1.65
MDH3YDL078C TRR1P29509 319 aaKnown RBP4.76□□□□□ -1.65
MDH3YDL078C ZRT1P32804 376 aa4.76□□□□□ -1.65
MDH3YDL078C YBR292CP38357 123 aa4.76□□□□□ -1.65
MDH3YDL078C RPB11P38902 120 aa4.76□□□□□ -1.65
MDH3YDL078C BUD8P41698 603 aa4.76□□□□□ -1.65
MDH3YDL078C GZF3P42944 551 aaKnown RBP4.76□□□□□ -1.65
MDH3YDL078C ERG25P53045 309 aa4.76□□□□□ -1.65
MDH3YDL078C AIM34Q03673 198 aa4.76□□□□□ -1.65
MDH3YDL078C YDR114CQ04597 100 aa4.76□□□□□ -1.65
MDH3YDL078C TRI1Q05024 226 aa4.76□□□□□ -1.65
MDH3YDL078C RAX2Q12465 1220 aa4.76□□□□□ -1.65
MDH3YDL078C CNE1P27825 502 aa4.75□□□□□ -1.65
MDH3YDL078C IMP1P28627 190 aa4.75□□□□□ -1.65
MDH3YDL078C YHR138CP38841 114 aaPredicted RBP4.75□□□□□ -1.65
MDH3YDL078C GPP2P40106 250 aaKnown RBP4.75□□□□□ -1.65
MDH3YDL078C HIT1P46973 164 aa4.75□□□□□ -1.65
MDH3YDL078C ADD37Q03233 198 aa4.75□□□□□ -1.65
MDH3YDL078C TSA2Q04120 196 aa4.75□□□□□ -1.65
MDH3YDL078C YMR317WQ04893 1140 aa4.75□□□□□ -1.65
MDH3YDL078C ASM4Q05166 528 aa4.75□□□□□ -1.65
MDH3YDL078C UPS1Q05776 175 aa4.75□□□□□ -1.65
MDH3YDL078C YOR186WQ08560 144 aa4.75□□□□□ -1.65
MDH3YDL078C PRM3Q08931 133 aa4.75□□□□□ -1.65
MDH3YDL078C YPL162CQ12042 273 aa4.75□□□□□ -1.65
MDH3YDL078C MPD1Q12404 318 aaKnown RBP4.75□□□□□ -1.65
MDH3YDL078C YMR105W-AQ8TGS8 64 aa4.75□□□□□ -1.65
MDH3YDL078C DYN1P36022 4092 aa4.75□□□□□ -1.65
MDH3YDL078C RFA3P26755 122 aaKnown RBP4.74□□□□□ -1.65
MDH3YDL078C YBR090CP38253 122 aa4.74□□□□□ -1.65
MDH3YDL078C FYV4P38783 130 aaPredicted RBP4.74□□□□□ -1.65
MDH3YDL078C PSD1P39006 500 aa4.74□□□□□ -1.65
MDH3YDL078C ERG28P40030 148 aa4.74□□□□□ -1.65
MDH3YDL078C YNL198CP40166 100 aa4.74□□□□□ -1.65
MDH3YDL078C YFL065CP43539 102 aa4.74□□□□□ -1.65
MDH3YDL078C DUG3P53871 357 aa4.74□□□□□ -1.65
MDH3YDL078C ABF2Q02486 183 aa4.74□□□□□ -1.65
MDH3YDL078C LDS2Q08218 356 aa4.74□□□□□ -1.65
MDH3YDL078C YPL264CQ08980 353 aa4.74□□□□□ -1.65
MDH3YDL078C YPR203WQ08994 102 aa4.74□□□□□ -1.65
MDH3YDL078C YOS1Q3E834 85 aa4.74□□□□□ -1.65
MDH3YDL078C CUP2P15315 225 aa4.73□□□□□ -1.65
MDH3YDL078C FCY2P17064 533 aa4.73□□□□□ -1.65
MDH3YDL078C YER076CP40049 302 aa4.73□□□□□ -1.65
MDH3YDL078C CCS1P40202 249 aaKnown RBP4.73□□□□□ -1.65
MDH3YDL078C HAC1P41546 238 aa4.73□□□□□ -1.65
MDH3YDL078C PIR5P46999 287 aa4.73□□□□□ -1.65
MDH3YDL078C YDL186WP48568 277 aa4.73□□□□□ -1.65
MDH3YDL078C WSC2P53832 503 aa4.73□□□□□ -1.65
MDH3YDL078C RRT7Q07829 113 aa4.73□□□□□ -1.65
MDH3YDL078C YOR029WQ12243 111 aa4.73□□□□□ -1.65
MDH3YDL078C YIL102C-AQ2V2P5 75 aa4.73□□□□□ -1.65
MDH3YDL078C ATG40Q99325 256 aa4.73□□□□□ -1.65
MDH3YDL078C COX10P21592 462 aa4.72□□□□□ -1.65
MDH3YDL078C TOA2P32774 122 aa4.72□□□□□ -1.65
MDH3YDL078C YKL070WP36087 169 aa4.72□□□□□ -1.65
MDH3YDL078C SWD2P36104 329 aaPredicted RBP4.72□□□□□ -1.65
MDH3YDL078C SLM6P38343 150 aa4.72□□□□□ -1.65
MDH3YDL078C ATX1P38636 73 aa4.72□□□□□ -1.65
MDH3YDL078C BXI1P48558 297 aa4.72□□□□□ -1.65
MDH3YDL078C YGL230CP53074 147 aa4.72□□□□□ -1.65
MDH3YDL078C CAB4P53332 305 aa4.72□□□□□ -1.65
MDH3YDL078C BUD25P85052 153 aa4.72□□□□□ -1.65
MDH3YDL078C RFM1Q12192 310 aa4.72□□□□□ -1.65
MDH3YDL078C YLR122CQ12312 125 aa4.72□□□□□ -1.65
MDH3YDL078C POR1P04840 283 aaKnown RBP4.71□□□□□ -1.66
MDH3YDL078C PCL2P25693 308 aa4.71□□□□□ -1.66
MDH3YDL078C MTC7P32633 139 aa4.71□□□□□ -1.66
MDH3YDL078C YEA4P40004 342 aa4.71□□□□□ -1.66
MDH3YDL078C MSA1Q08471 629 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms