RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	IMD2	P38697	523 aa	Known RBP	4.79	□□□□□ -1.64
LDS1	YAL018C	OCA2	P53949	197 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	UBC7	Q02159	165 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	LRS4	Q04087	347 aa	Known RBP	4.79	□□□□□ -1.64
LDS1	YAL018C	YMR253C	Q04835	414 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	ATX2	Q12067	313 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	AYT1	Q12226	474 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YGR035W-A	Q45U48	73 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	RPL11A	P0C0W9	174 aa	Known RBP	4.78	□□□□□ -1.64
LDS1	YAL018C	MRP2	P10663	115 aa	Predicted RBP	4.78	□□□□□ -1.64
LDS1	YAL018C	LAC1	P28496	418 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	TIR2	P33890	251 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	YHR173C	P38864	112 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	HSP10	P38910	106 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	SNF11	P38956	169 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	IMP2	P46972	177 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	YJL027C	P47063	138 aa	Predicted RBP	4.78	□□□□□ -1.64
LDS1	YAL018C	TIM21	P53220	239 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	LOA1	Q06508	300 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	ZEO1	Q08245	113 aa		4.78	□□□□□ -1.64
LDS1	YAL018C	RPL11B	Q3E757	174 aa	Predicted RBP	4.78	□□□□□ -1.64
LDS1	YAL018C	MRS1	P07266	363 aa		4.77	□□□□□ -1.65
LDS1	YAL018C	MRPL20	P22354	195 aa	Predicted RBP	4.77	□□□□□ -1.65
LDS1	YAL018C	MRPS9	P38120	278 aa		4.77	□□□□□ -1.65
LDS1	YAL018C	PGD1	P40356	397 aa		4.77	□□□□□ -1.65
LDS1	YAL018C	YML108W	Q03759	105 aa		4.77	□□□□□ -1.65
LDS1	YAL018C	FIT2	Q08906	153 aa		4.77	□□□□□ -1.65
LDS1	YAL018C	RPB3	P16370	318 aa	Known RBP	4.76	□□□□□ -1.65
LDS1	YAL018C	RPS0A	P32905	252 aa	Known RBP	4.76	□□□□□ -1.65
LDS1	YAL018C	LSM2	P38203	95 aa	Known RBP	4.76	□□□□□ -1.65
LDS1	YAL018C	YIL077C	P40508	320 aa		4.76	□□□□□ -1.65
LDS1	YAL018C	GPI2	P46961	280 aa		4.76	□□□□□ -1.65
LDS1	YAL018C	SNO1	Q03144	224 aa		4.76	□□□□□ -1.65
LDS1	YAL018C	RRG8	Q06109	277 aa		4.76	□□□□□ -1.65
LDS1	YAL018C	FMP49	A0A023PZB3	126 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	COQ3	P27680	312 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	UTR5	P32630	166 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	PHD1	P36093	366 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	FIP1	P45976	327 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	RPA43	P46669	326 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	BNS1	P50084	137 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	YGL185C	P53100	379 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	HHO1	P53551	258 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	DAD3	P69850	94 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	YMR181C	Q03231	154 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	IZH1	Q03419	316 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	YPR145C-A	Q2V2P0	78 aa		4.75	□□□□□ -1.65
LDS1	YAL018C	HTB2	P02294	131 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	YHR212W-A	P0CX91	67 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	NHP6A	P11632	93 aa	Known RBP	4.74	□□□□□ -1.65
LDS1	YAL018C	CMC1	P36064	111 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	ATG8	P38182	117 aa	RIP-Chip data	4.74	□□□□□ -1.65	not detected
LDS1	YAL018C	SNU13	P39990	126 aa	Known RBP	4.74	□□□□□ -1.65
LDS1	YAL018C	PAU15	P40585	124 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	HAM1	P47119	197 aa	Known RBP	4.74	□□□□□ -1.65
LDS1	YAL018C	AIM24	P47127	394 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	MGA1	P53050	456 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	ATP19	P81451	68 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	IZH3	Q07959	543 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	GEP3	Q08622	556 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	YPL162C	Q12042	273 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	SMT3	Q12306	101 aa	Known RBP	4.74	□□□□□ -1.65
LDS1	YAL018C	YLR118C	Q12354	227 aa		4.74	□□□□□ -1.65
LDS1	YAL018C	NTF2	P33331	125 aa	Known RBP	4.73	□□□□□ -1.65
LDS1	YAL018C	YBR144C	P34215	104 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	YPT10	P38146	199 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	AME1	P38313	324 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	MBB1	P39534	108 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	GLE2	P40066	365 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	VMA21	P41806	77 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	MOG1	P47123	218 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	APS2	Q00381	147 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	ATG39	Q06159	398 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	SNU23	Q12368	194 aa	Predicted RBP	4.73	□□□□□ -1.65
LDS1	YAL018C	DCN1	Q12395	269 aa		4.73	□□□□□ -1.65
LDS1	YAL018C	RPP2A	P05319	106 aa	Known RBP	4.72	□□□□□ -1.65
LDS1	YAL018C	RPL31B	P0C2H9	113 aa	Known RBP	4.72	□□□□□ -1.65
LDS1	YAL018C	SRP21	P32342	167 aa		4.72	□□□□□ -1.65
LDS1	YAL018C	MRPL49	P40858	161 aa	Predicted RBP	4.72	□□□□□ -1.65
LDS1	YAL018C	FYV6	P53913	173 aa		4.72	□□□□□ -1.65
LDS1	YAL018C	NAT3	Q06504	195 aa		4.72	□□□□□ -1.65
LDS1	YAL018C	YOR105W	Q08504	108 aa		4.72	□□□□□ -1.65
LDS1	YAL018C	UTP23	Q12339	254 aa	Known RBP	4.72	□□□□□ -1.65
LDS1	YAL018C	YOP1	Q12402	180 aa		4.72	□□□□□ -1.65
LDS1	YAL018C	LAS17	Q12446	633 aa		4.72	□□□□□ -1.65
LDS1	YAL018C	POF1	P25576	258 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	MPC2	P38857	129 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	YIL163C	P40448	117 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	DAN1	P47178	298 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	RAV2	Q03956	351 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	TRI1	Q05024	226 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	YOL160W	Q08321	113 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	YPR063C	Q12160	140 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	DAD1	Q12248	94 aa		4.71	□□□□□ -1.66
LDS1	YAL018C	YLR302C	O13544	120 aa		4.7	□□□□□ -1.66
LDS1	YAL018C	TIR1	P10863	254 aa		4.7	□□□□□ -1.66
LDS1	YAL018C	SDH4	P37298	181 aa		4.7	□□□□□ -1.66
LDS1	YAL018C	IRC22	P40006	225 aa		4.7	□□□□□ -1.66
LDS1	YAL018C	GTT1	P40582	234 aa		4.7	□□□□□ -1.66
LDS1	YAL018C	HIT1	P46973	164 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms