RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 BCAT1P54687 386 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 SESN3P58005 492 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 PTGISQ16647 500 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 BOLA3Q53S33 107 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 ITPRIPL1Q6GPH6 555 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 PID1Q7Z2X4 250 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 LENG9Q96B70 501 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 RBPJLQ9UBG7 517 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 TLK1Q9UKI8 766 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 MGAT5BQ3V5L5 792 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 SHISA4Q96DD7 197 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 FAM118BQ9BPY3 351 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 GANQ9H2C0 597 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 SMYD2Q9NRG4 433 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 ZNF112Q9UJU3 913 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 HPCAL4Q9UM19 191 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 TTC36A6NLP5 189 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 GOLGA8CPA6NN73 597 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 PRKCIP41743 596 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 MARSP56192 900 aaKnown RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 E2F5Q15329 346 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 MCOLN2Q8IZK6 566 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 CELF4Q9BZC1 486 aaKnown RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 IKZF4Q9H2S9 585 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 TRIM17Q9Y577 477 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 ZBTB24O43167 697 aaPredicted RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 GJB1P08034 283 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 NCAM1P13591 858 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 ITIH2P19823 946 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 ACO1P21399 889 aaKnown RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 KCNA3P22001 575 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 NDST1P52848 882 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 MEI1Q5TIA1 1274 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 C12orf56Q8IXR9 622 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 SEPT8Q92599 483 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 CDT1Q9H211 546 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 FNDC3AQ9Y2H6 1198 aaKnown RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 SH3BP5O60239 455 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 ALDH7A1P49419 539 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 ZKSCAN8Q15776 578 aaPredicted RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 NOP9Q86U38 636 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 DDX27Q96GQ7 796 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 ABI2Q9NYB9 513 aaPredicted RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.55□□□□□ -0.08
CIITA-213ENST00000618327 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 FRMD3A2A2Y4 597 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 CASTOR2A6NHX0 329 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 BNIP3LO60238 219 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 PROSCO94903 275 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 HIRAP54198 1017 aaPredicted RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 CDH8P55286 799 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 P3H1Q32P28 736 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 SPATA18Q8TC71 538 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 ACSF2Q96CM8 615 aaPredicted RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 NMRK2Q9NPI5 230 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 MYH14Q7Z406 1995 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 RECQL4O94761 1208 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 SUN1O94901 812 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 LHX1P48742 406 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 CENPCQ03188 943 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 KLHL38Q2WGJ6 581 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 BAP1Q92560 729 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 ERP44Q9BS26 406 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 SPON2Q9BUD6 331 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 MTIF3Q9H2K0 278 aaKnown RBP14.55□□□□□ -0.08
CIITA-213ENST00000618327 SP110Q9HB58 689 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.55□□□□□ -0.08
CIITA-213ENST00000618327 BFARQ9NZS9 450 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 ZNF536O15090 1300 aa14.55□□□□□ -0.08
CIITA-213ENST00000618327 DFFAO00273 331 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 EEF2KO00418 725 aaKnown RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 HIF1AQ16665 826 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 WDR59Q6PJI9 974 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 ATP11CQ8NB49 1132 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 TMEM88BA6NKF7 163 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 RASA4BC9J798 803 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 PJA2O43164 708 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 HOXA2O43364 376 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 RASA4O43374 803 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 ZNF862O60290 1169 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 ZNF189O75820 626 aaPredicted RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 RBP3P10745 1247 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 TRIM42Q8IWZ5 723 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 CCDC197Q8NCU1 140 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 ARHGEF26Q96DR7 871 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 TRIM4Q9C037 500 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 UBN1Q9NPG3 1134 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 MAFBQ9Y5Q3 323 aaPredicted RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 SMIM24O75264 130 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 POMCP01189 267 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 KRT10P13645 584 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 PBX1P40424 430 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 CARSP49589 748 aaKnown RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 FLT3LGP49771 235 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms