RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZCCHC9Q8N567 271 aaKnown RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 GSTCDQ8NEC7 633 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 PPP1R14CQ8TAE6 165 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 EBF3Q9H4W6 596 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 PCDHB4Q9Y5E5 795 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 LAMB1P07942 1786 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 E7ENQ6 273 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 F8VP50 259 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 ZWINTO95229 277 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 CYP1A1P04798 512 aaPredicted RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 ATP6V1B1P15313 513 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 BMPR2Q13873 1038 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 ZNF568Q3ZCX4 644 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 Q4G0T1 1027 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 FAXCQ5TGI0 409 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 SV2AQ7L0J3 742 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 NLRX1Q86UT6 975 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 CERS5Q8N5B7 392 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 RBM15BQ8NDT2 890 aaKnown RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 FBXL13Q8NEE6 735 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 IVNS1ABPQ9Y6Y0 642 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 AVILO75366 819 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 MAN1A1P33908 653 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 SLC25A3Q00325 362 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 UBAP2LQ14157 1087 aaKnown RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 CLEC16AQ2KHT3 1053 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 FNBP1LQ5T0N5 605 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 PPM1NQ8N819 430 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 ZC3H12CQ9C0D7 883 aaKnown RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 PCSK1NQ9UHG2 260 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 DNALI1O14645 258 aaPredicted RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 MYCLP12524 364 aaPredicted RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 GLRA2P23416 452 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 DSG3P32926 999 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 GEMIN4P57678 1058 aaKnown RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 CCNG2Q16589 344 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 CCDC33Q8N5R6 958 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 CCDC110Q8TBZ0 833 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 MTBPQ96DY7 904 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 PRDM16Q9HAZ2 1276 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 C1orf112Q9NSG2 853 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 SCAF8Q9UPN6 1271 aaKnown RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 TCRBV7S3A2A0A539 114 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 ZMPSTE24O75844 475 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 TOP3BO95985 862 aaKnown RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 ANPEPP15144 967 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 ACOT2P49753 483 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 DSG1Q02413 1049 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 MYBPC3Q14896 1274 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 RAPH1Q70E73 1250 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 TREML1Q86YW5 311 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 MORC4Q8TE76 937 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 SHC3Q92529 594 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 OXNAD1Q96HP4 312 aaPredicted RBP13.81□□□□□ -0.2
MSH6-214ENST00000616033 GLT8D2Q9H1C3 349 aa13.81□□□□□ -0.2
MSH6-214ENST00000616033 MYOCOSA0A1B0GUC4 107 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 RNASEH1O60930 286 aaKnown RBP13.8□□□□□ -0.2
MSH6-214ENST00000616033 FOSP01100 380 aaPredicted RBP13.8□□□□□ -0.2
MSH6-214ENST00000616033 GPX6P59796 221 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 SCUBE1Q8IWY4 988 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 PIP4K2CQ8TBX8 421 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 TEKT3Q9BXF9 490 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 WDR11Q9BZH6 1224 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 PRR12Q9ULL5 1215 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 AK5Q9Y6K8 562 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 DENND3A2RUS2 1198 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 INHBAP08476 426 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 HADHBP55084 474 aaKnown RBP13.8□□□□□ -0.2
MSH6-214ENST00000616033 GDF10P55107 478 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 AP1B1Q10567 949 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 PTK7Q13308 1070 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 RSPH3Q86UC2 560 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 SATL1Q86VE3 508 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 RSAD2Q8WXG1 361 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 MAF1Q9H063 256 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
MSH6-214ENST00000616033 TBX3O15119 743 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 TYROBPO43914 113 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 POLR2MP0CAP2 368 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 ASPHQ12797 758 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 CEP55Q53EZ4 464 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 LCA5Q86VQ0 697 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 MKL1Q969V6 931 aa13.8□□□□□ -0.2
MSH6-214ENST00000616033 PPP1R36Q96LQ0 422 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms