RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CENPUQ71F23 418 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 PRCCQ92733 491 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 RSRC1Q96IZ7 334 aaKnown RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 MRPL4Q9BYD3 311 aaKnown RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 SLCO1B3Q9NPD5 702 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 TJP2Q9UDY2 1190 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ZNF112Q9UJU3 913 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 A0A1W2PPM1 405 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 A8MUI8 341 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 TOM1L1O75674 476 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ASMTLO95671 621 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 KRT16P08779 473 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 CA4P22748 312 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ICAM3P32942 547 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 RPA3P35244 121 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 RFC1P35251 1148 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 NR1H3Q13133 447 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 DENND1BQ6P3S1 775 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 CDR2LQ86X02 465 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 THNSL1Q8IYQ7 743 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 LRRC71Q8N4P6 559 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 FAXDC2Q96IV6 333 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 RLFQ13129 1914 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 MSCO60682 206 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ORC1Q13415 861 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 SPARCL1Q14515 664 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ZNF268Q14587 947 aaPredicted RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 TARBP2Q15633 366 aaKnown RBP13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ZPBP2Q6X784 338 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 ACTL9Q8TC94 416 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 PHTF1Q9UMS5 762 aa13.72□□□□□ -0.21
CACNB3-219ENST00000551544 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
CACNB3-219ENST00000551544 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 NFKBIEO00221 500 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 ALOX15BO15296 676 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 FAM189A1O60320 539 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 ITGAVP06756 1048 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-219ENST00000551544 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-219ENST00000551544 RAP1GAPP47736 663 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 AP3M2P53677 418 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 GDF10P55107 478 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 LACTBP83111 547 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-219ENST00000551544 OTUD4Q01804 1114 aaKnown RBP13.71□□□□□ -0.21
CACNB3-219ENST00000551544 HIF1AQ16665 826 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 ACCSLQ4AC99 568 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 RNF43Q68DV7 783 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 ANKLE1Q8NAG6 615 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-219ENST00000551544 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 STAMBPL1Q96FJ0 436 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 GRID1Q9ULK0 1009 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 POLIQ9UNA4 740 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
CACNB3-219ENST00000551544 OGTO15294 1046 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 CST8O60676 142 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 MAFO75444 373 aaPredicted RBP13.71□□□□□ -0.22
CACNB3-219ENST00000551544 PRKCBP05771 671 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 KRT19P08727 400 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 KRT3P12035 628 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 ALADP13716 330 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 EIF4BP23588 611 aaKnown RBP13.71□□□□□ -0.22
CACNB3-219ENST00000551544 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.22
CACNB3-219ENST00000551544 HIRAP54198 1017 aaPredicted RBP13.71□□□□□ -0.22
CACNB3-219ENST00000551544 EFTUD2Q15029 972 aaKnown RBP eCLIP13.71□□□□□ -0.22
CACNB3-219ENST00000551544 SLC1A5Q15758 541 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 PTPN20Q4JDL3 420 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 ANKRD22Q5VYY1 191 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 TRIM50Q86XT4 487 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 EMC1Q8N766 993 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 DENND1AQ8TEH3 1009 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 AGAP11Q8TF27 550 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 KCNN1Q92952 543 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.22
CACNB3-219ENST00000551544 ZNF518BQ9C0D4 1074 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 BATF3Q9NR55 127 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 SHOC2Q9UQ13 582 aa13.71□□□□□ -0.22
CACNB3-219ENST00000551544 DOCK1Q14185 1865 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 RPSAP08865 295 aaKnown RBP13.7□□□□□ -0.22
CACNB3-219ENST00000551544 IL1R2P27930 398 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 SSTR1P30872 391 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 TAP1Q03518 808 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 FAM160B1Q5W0V3 765 aa13.7□□□□□ -0.22
CACNB3-219ENST00000551544 TDRPQ86YL5 185 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms