RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 METTL5Q9NRN9 209 aaKnown RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 ADAM21Q9UKJ8 722 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 UBQLN1Q9UMX0 589 aaKnown RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 R3HDM2Q9Y2K5 976 aaKnown RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 SNX24Q9Y343 169 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 GOLGA8KD6RF30 607 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 F8VP50 259 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 OPA1O60313 960 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 KPNA6O60684 536 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 HMGCRP04035 888 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 PFKMP08237 780 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 C6orf222P0C671 652 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 AKAP5P24588 427 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 GPD2P43304 727 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 SSR1P43307 286 aaKnown RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 GABRB2P47870 512 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 FCGRTP55899 365 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 NKX3-2P78367 333 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 PDCLQ13371 301 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 ZNF268Q14587 947 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 GOLGA7BQ2TAP0 167 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 C9orf57Q5W0N0 161 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 TXNRD3NBQ6F5E7 133 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 CCDC50Q8IVM0 306 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 NME8Q8N427 588 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 SMG8Q8ND04 991 aaKnown RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 FNIP1Q8TF40 1166 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 ARL8AQ96BM9 186 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 MCRS1Q96EZ8 462 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 RBM41Q96IZ5 413 aaKnown RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 RUFY1Q96T51 708 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 FMO2Q99518 471 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 NT5C1AQ9BXI3 368 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 OSBPL8Q9BZF1 889 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 TRIM6Q9C030 488 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-208ENST00000551338 FAM204AQ9H8W3 233 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 RNF19AQ9NV58 838 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 TSPAN16Q9UKR8 245 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 TRPV2Q9Y5S1 764 aa12.16□□□□□ -0.46
RAB5C-208ENST00000551338 PI4K2BG5E9Z4 385 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 H0YGN5 161 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 PPFIA2O75334 1257 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 ECEL1O95672 775 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 GNAT1P11488 350 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 KCNE1P15382 129 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 PSMA2P25787 234 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 PTPN7P35236 360 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 RFC1P35251 1148 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-208ENST00000551338 PSMC4P43686 418 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 MRPS6P82932 125 aaKnown RBP12.15□□□□□ -0.46
RAB5C-208ENST00000551338 KRT17Q04695 432 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 SOX4Q06945 474 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-208ENST00000551338 TRIM32Q13049 653 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 MTMR3Q13615 1198 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 PTK6Q13882 451 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 MFSD14CQ5VZR4 134 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 LCLAT1Q6UWP7 414 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 MFSD7Q6UXD7 560 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 LRIG3Q6UXM1 1119 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 CCDC105Q8IYK2 499 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 ARFGAP1Q8N6T3 406 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 UBA3Q8TBC4 463 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 WNT8BQ93098 351 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
RAB5C-208ENST00000551338 RNF39Q9H2S5 420 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 KLK14Q9P0G3 267 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
RAB5C-208ENST00000551338 IPPQ9Y573 584 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 SNX9Q9Y5X1 595 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 NFS1Q9Y697 457 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 CDY2AQ9Y6F7 541 aa12.15□□□□□ -0.46
RAB5C-208ENST00000551338 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 PTPRDP23468 1912 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 SMIM28A0A1B0GU29 152 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 PIRO00625 290 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 ADAMTS4O75173 837 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 LRCH4O75427 683 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 KRT3P12035 628 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 GBP1P32455 592 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 CAP1Q01518 475 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 SLC25A11Q02978 314 aaKnown RBP12.14□□□□□ -0.47
RAB5C-208ENST00000551338 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
RAB5C-208ENST00000551338 SNX1Q13596 522 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 STILQ15468 1287 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 CCNG2Q16589 344 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 SPDYCQ5MJ68 293 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms