RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 ASB1Q9Y576 335 aa5.5□□□□□ -1.53
CLDND1-212ENST00000506885 PCDHA1Q9Y5I3 950 aa5.5□□□□□ -1.53
CLDND1-212ENST00000506885 hCG_1807616A0A1W2PRN6 198 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 GOLGA6L22H0YM25 854 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 AP3D1O14617 1153 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 IGHDP01880 384 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 TK1P04183 234 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 C8BP07358 591 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 RXRAP19793 462 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 IL11P20809 199 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 ATP6V1E1P36543 226 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 FLT3LGP49771 235 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 ARFIP2P53365 341 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 PNLIPRP1P54315 467 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 SLC6A3Q01959 620 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 ROM1Q03395 351 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 ADAM9Q13443 819 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 EIF4A2Q14240 407 aaKnown RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 NFIXQ14938 502 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 WTAPQ15007 396 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 SNX30Q5VWJ9 437 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 RRAGBQ5VZM2 374 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 ARL6IP4Q66PJ3 421 aaKnown RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 SLFN12LQ6IEE8 588 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 DBX2Q6ZNG2 339 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 MFSD6Q6ZSS7 791 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 FAM47EQ6ZV65 393 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 BBS12Q6ZW61 710 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 FRMD5Q7Z6J6 570 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 RBM12BQ8IXT5 1001 aaKnown RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 RPAP2Q8IXW5 612 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 CARFQ8N187 725 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 CARNMT1Q8N4J0 409 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 TP53I13Q8NBR0 393 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 CCDC150Q8NCX0 1101 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 OR8H1Q8NGG4 311 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 OR6B3Q8NGW1 331 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 MAML1Q92585 1016 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 NEIL1Q96FI4 390 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 MRGPRX4Q96LA9 322 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 SPAG5Q96R06 1193 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 TWNKQ96RR1 684 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 WRNIP1Q96S55 665 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 P2RX7Q99572 595 aaKnown RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 C11orf84Q9BUA3 381 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 DDX23Q9BUQ8 820 aaKnown RBP5.49□□□□□ -1.53
CLDND1-212ENST00000506885 MAGEB5Q9BZ81 275 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 SIL1Q9H173 461 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 XYLT2Q9H1B5 865 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 PRDM13Q9H4Q3 707 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 CXorf56Q9H5V9 222 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 WDCPQ9H6R7 721 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 GRPEL1Q9HAV7 217 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 DTLQ9NZJ0 730 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 RPS6KA6Q9UK32 745 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 TBX20Q9UMR3 447 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 SNX8Q9Y5X2 465 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 GPRASP1Q5JY77 1395 aa5.49□□□□□ -1.53
CLDND1-212ENST00000506885 TCRBV5S2A0A599 114 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 FCHO1O14526 889 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 SLC27A2O14975 620 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 SPTLC2O15270 562 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 HTATSF1O43719 755 aaKnown RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 HMMRO75330 724 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 ACTL6BO94805 426 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 CSF1P09603 554 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 ACADMP11310 421 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 GABRB3P28472 473 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 AARSP49588 968 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 CARSP49589 748 aaKnown RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 GPR15P49685 360 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 HERVK_113P62684 666 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 IFI35P80217 286 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 NEXNQ0ZGT2 675 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 FSTL1Q12841 308 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 TARDBPQ13148 414 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 RAB39AQ14964 217 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 TTC31Q49AM3 519 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 NFRKBQ6P4R8 1299 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 UNC13DQ70J99 1090 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 R3HCC1LQ7Z5L2 792 aaKnown RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 ERC1Q8IUD2 1116 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 ARL6IP6Q8N6S5 226 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 MGARPQ8TDB4 240 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 SDCCAG3Q96C92 435 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 TEPSINQ96N21 525 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 FOXB1Q99853 325 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 DESI2Q9BSY9 194 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 MXD3Q9BW11 206 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 DPH1Q9BZG8 443 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 PABPC3Q9H361 631 aaKnown RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 RNPEPQ9H4A4 650 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 TAF1DQ9H5J8 278 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-212ENST00000506885 INCENPQ9NQS7 918 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 USP40Q9NVE5 1235 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 HSPBP1Q9NZL4 362 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 MTRRQ9UBK8 725 aa5.48□□□□□ -1.53
CLDND1-212ENST00000506885 PCDHGB4Q9UN71 923 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms