RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
CLDND1-212ENST00000506885 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
CLDND1-212ENST00000506885 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
CLDND1-212ENST00000506885 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
CLDND1-212ENST00000506885 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
CLDND1-212ENST00000506885 FOXD1Q16676 465 aa18.35■□□□□ 0.53
CLDND1-212ENST00000506885 MSH5O43196 834 aa17.74■□□□□ 0.43
CLDND1-212ENST00000506885 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-212ENST00000506885 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
CLDND1-212ENST00000506885 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
CLDND1-212ENST00000506885 ADRA2BP18089 450 aa16.55■□□□□ 0.24
CLDND1-212ENST00000506885 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
CLDND1-212ENST00000506885 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
CLDND1-212ENST00000506885 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
CLDND1-212ENST00000506885 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
CLDND1-212ENST00000506885 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
CLDND1-212ENST00000506885 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
CLDND1-212ENST00000506885 POTEHQ6S545 545 aa14.75□□□□□ -0.05
CLDND1-212ENST00000506885 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
CLDND1-212ENST00000506885 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
CLDND1-212ENST00000506885 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
CLDND1-212ENST00000506885 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
CLDND1-212ENST00000506885 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
CLDND1-212ENST00000506885 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
CLDND1-212ENST00000506885 KCNA4P22459 653 aa14.15□□□□□ -0.14
CLDND1-212ENST00000506885 DNAJC5BQ9UF47 199 aa14.14□□□□□ -0.15
CLDND1-212ENST00000506885 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
CLDND1-212ENST00000506885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLDND1-212ENST00000506885 DSG3P32926 999 aa13.62□□□□□ -0.23
CLDND1-212ENST00000506885 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
CLDND1-212ENST00000506885 CAPN15O75808 1086 aa13.55□□□□□ -0.24
CLDND1-212ENST00000506885 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
CLDND1-212ENST00000506885 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
CLDND1-212ENST00000506885 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-212ENST00000506885 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
CLDND1-212ENST00000506885 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
CLDND1-212ENST00000506885 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
CLDND1-212ENST00000506885 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CLDND1-212ENST00000506885 APLP2Q06481 763 aa13.17□□□□□ -0.3
CLDND1-212ENST00000506885 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
CLDND1-212ENST00000506885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
CLDND1-212ENST00000506885 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
CLDND1-212ENST00000506885 ABCB7O75027 752 aa13.13□□□□□ -0.31
CLDND1-212ENST00000506885 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
CLDND1-212ENST00000506885 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-212ENST00000506885 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-212ENST00000506885 ZBTB22O15209 634 aa12.96□□□□□ -0.33
CLDND1-212ENST00000506885 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
CLDND1-212ENST00000506885 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
CLDND1-212ENST00000506885 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
CLDND1-212ENST00000506885 HAX1O00165 279 aa12.78□□□□□ -0.36
CLDND1-212ENST00000506885 POLA2Q14181 598 aa12.75□□□□□ -0.37
CLDND1-212ENST00000506885 PLSCR2Q9NRY7 297 aa12.67□□□□□ -0.38
CLDND1-212ENST00000506885 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
CLDND1-212ENST00000506885 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
CLDND1-212ENST00000506885 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
CLDND1-212ENST00000506885 LHX8Q68G74 356 aa12.49□□□□□ -0.41
CLDND1-212ENST00000506885 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
CLDND1-212ENST00000506885 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-212ENST00000506885 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLDND1-212ENST00000506885 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
CLDND1-212ENST00000506885 EVX2Q03828 476 aa12.35□□□□□ -0.43
CLDND1-212ENST00000506885 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
CLDND1-212ENST00000506885 FBLN2P98095 1184 aa12.27□□□□□ -0.45
CLDND1-212ENST00000506885 GABBR2O75899 941 aa12.12□□□□□ -0.47
CLDND1-212ENST00000506885 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-212ENST00000506885 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
CLDND1-212ENST00000506885 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
CLDND1-212ENST00000506885 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
CLDND1-212ENST00000506885 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
CLDND1-212ENST00000506885 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
CLDND1-212ENST00000506885 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
CLDND1-212ENST00000506885 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
CLDND1-212ENST00000506885 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
CLDND1-212ENST00000506885 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
CLDND1-212ENST00000506885 POTEMA6NI47 508 aa11.83□□□□□ -0.52
CLDND1-212ENST00000506885 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
CLDND1-212ENST00000506885 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
CLDND1-212ENST00000506885 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
CLDND1-212ENST00000506885 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
CLDND1-212ENST00000506885 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
CLDND1-212ENST00000506885 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLDND1-212ENST00000506885 CLCN6P51797 869 aa11.71□□□□□ -0.53
CLDND1-212ENST00000506885 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
CLDND1-212ENST00000506885 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
CLDND1-212ENST00000506885 FKBP8Q14318 412 aa11.62□□□□□ -0.55
CLDND1-212ENST00000506885 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
CLDND1-212ENST00000506885 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
CLDND1-212ENST00000506885 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
CLDND1-212ENST00000506885 PROM2Q8N271 834 aa11.57□□□□□ -0.56
CLDND1-212ENST00000506885 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
CLDND1-212ENST00000506885 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
CLDND1-212ENST00000506885 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
CLDND1-212ENST00000506885 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
CLDND1-212ENST00000506885 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
CLDND1-212ENST00000506885 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
CLDND1-212ENST00000506885 PLEKHG5O94827 1062 aa11.31□□□□□ -0.6
CLDND1-212ENST00000506885 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
CLDND1-212ENST00000506885 MIER1Q8N108 512 aa11.24□□□□□ -0.61
CLDND1-212ENST00000506885 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms