RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 KLHL11Q9NVR0 708 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 CPSF3Q9UKF6 684 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SMG5Q9UPR3 1016 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 DERAQ9Y315 318 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 CNTNAP2Q9UHC6 1331 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TMEM191CA6NGB0 347 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 UNCXA6NJT0 531 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SIGLEC16A6NMB1 481 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 LACTBL1A8MY62 500 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TRAPPC3O43617 180 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 LIASO43766 372 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 CXCL8P10145 99 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 BRAFP15056 766 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ACO1P21399 889 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SDC4P31431 198 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 FLT3P36888 993 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PNPLA4P41247 253 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ACADSBP45954 432 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 RAP1GAPP47736 663 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 IFNAR2P48551 515 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 VCPP55072 806 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 EIF3EP60228 445 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 BASP1P80723 227 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PTPN11Q06124 597 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PDIA2Q13087 525 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SPARCL1Q14515 664 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PDK2Q15119 407 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 LLGL1Q15334 1064 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TARBP2Q15633 366 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 UAP1Q16222 522 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 HIF1AQ16665 826 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 GOLGA7BQ2TAP0 167 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 C9orf131Q5VYM1 1079 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 JADE1Q6IE81 842 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TTC27Q6P3X3 843 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 NOTUMQ6P988 496 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 RSPH3Q86UC2 560 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SESTD1Q86VW0 696 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TRIM50Q86XT4 487 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TRIM42Q8IWZ5 723 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ZBED8Q8IZ13 594 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 OR6B3Q8NGW1 331 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PPTC7Q8NI37 304 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 LRRC8CQ8TDW0 803 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SREK1Q8WXA9 508 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ATG4AQ8WYN0 398 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 DDX27Q96GQ7 796 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SGSM3Q96HU1 749 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 RAB3IPQ96QF0 476 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TSPAN18Q96SJ8 248 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 MED10Q9BTT4 135 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 KATNAL1Q9BW62 490 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 FRMD8Q9BZ67 464 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 KLC2Q9H0B6 622 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 APOBEC3GQ9HC16 384 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 GRHL1Q9NZI5 618 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PSMC3IPQ9P2W1 217 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 POLIQ9UNA4 740 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 KCNH4Q9UQ05 1017 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SHOC2Q9UQ13 582 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SLC45A1Q9Y2W3 748 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 A0A087WZ62 844 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CCL15-CCL14A0A0B4J2E2 113 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 RASA4BC9J798 803 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 RASA4O43374 803 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SPAG6O75602 509 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NEBLO76041 1014 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TOMM70O94826 608 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MICAL2O94851 1124 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NPTXRO95502 500 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZBED1O96006 694 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 HMGCRP04035 888 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ITGAVP06756 1048 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CYP2C8P10632 490 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 INSRRP14616 1297 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ATP4AP20648 1035 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MMP8P22894 467 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ECHS1P30084 290 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 AXLP30530 894 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ARL4AP40617 200 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MNAT1P51948 309 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 IRX5P78411 483 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MBTD1Q05BQ5 628 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GRIK4Q16099 956 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CCL15Q16663 113 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FAM187BQ17R55 369 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SV2CQ496J9 727 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 DRICH1Q6PGQ1 229 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MTHFD1LQ6UB35 978 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZDHHC24Q6UX98 284 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CRELD2Q6UXH1 353 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PLEKHH3Q7Z736 793 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZDHHC17Q8IUH5 632 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ALLCQ8N6M5 410 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NIPA2Q8N8Q9 360 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FBXO41Q8TF61 875 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ELMO3Q96BJ8 720 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TLCD1Q96CP7 247 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms