RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 NCAM1P13591 858 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 EPHX2P34913 555 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 PARP9Q8IXQ6 854 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 ZNF507Q8TCN5 953 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 PABPC5Q96DU9 382 aaKnown RBP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MRIQ9BWK5 157 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 CHORDC1Q9UHD1 332 aaPredicted RBP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 SH3BP1Q9Y3L3 701 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MAPK7Q13164 816 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 HIC1Q14526 733 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 SYTL3Q4VX76 610 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 PRUNE1Q86TP1 453 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 ACTRT1Q8TDG2 376 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 USP33Q8TEY7 942 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 MTMR12Q9C0I1 747 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 AAASQ9NRG9 546 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 C20orf96Q9NUD7 363 aaPredicted RBP14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 GRID1Q9ULK0 1009 aa14.03□□□□□ -0.16
CHRNA4-202ENST00000463705 F8VZ95 297 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 NFIBO00712 420 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 AKAP3O75969 853 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 BCAT1P54687 386 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 GEMIN4P57678 1058 aaKnown RBP14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 CUL3Q13618 768 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 PAPD7Q5XG87 772 aaKnown RBP14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 AGGF1Q8N302 714 aaeCLIP14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 FOPNLQ96NB1 174 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 TRAF3IP3Q9Y228 551 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 MTO1Q9Y2Z2 717 aaKnown RBP14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 CAPN6Q9Y6Q1 641 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 H0Y3Z8 333 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 HMOX2P30519 316 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 ALDH1A3P47895 512 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 HERVK_113P62684 666 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 C3orf62Q6ZUJ4 267 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 CCT8L2Q96SF2 557 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 PSD3Q9NYI0 1048 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 WHRNQ9P202 907 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 ITGA11Q9UKX5 1188 aa14.02□□□□□ -0.16
CHRNA4-202ENST00000463705 EGFRP00533 1210 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 APOA4P06727 396 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 MAP4P27816 1152 aaKnown RBP14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 GEMP55040 296 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 SMAD1Q15797 465 aaKnown RBP14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 LRRC43Q8N309 656 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 KIAA0895Q8NCT3 520 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 ATXN7L3BQ96GX2 97 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 FAM118BQ9BPY3 351 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 KLHL2O95198 593 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 PMS1P54277 932 aaKnown RBP14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 KYNUQ16719 465 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 USP13Q92995 863 aaPredicted RBP14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 LACRTQ9GZZ8 138 aa14.02□□□□□ -0.17
CHRNA4-202ENST00000463705 CYP3A4P08684 503 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 RARS2Q5T160 578 aaKnown RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 C11orf63Q6NUN7 778 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 WDR93Q6P2C0 686 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 CHSY1Q86X52 802 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 MFN1Q8IWA4 741 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PCSK9Q8NBP7 692 aaKnown RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PNMA5Q96PV4 448 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 EIF2AQ9BY44 585 aaKnown RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 AFF4Q9UHB7 1163 aaKnown RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PCDHGB4Q9UN71 923 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 GOLGA8RI6L899 631 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 ZNF263O14978 683 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 ANGPT2O15123 496 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 HMBSP08397 361 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 KRT4P19013 534 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 IL10P22301 178 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PTGER2P43116 358 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 DACT3Q96B18 629 aaPredicted RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 STAMBPL1Q96FJ0 436 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 TASP1Q9H6P5 420 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 ANLNQ9NQW6 1124 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PCMTD2Q9NV79 361 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 ARHGAP20Q9P2F6 1191 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 FRMPD4Q14CM0 1322 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 RGS4P49798 205 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PSMC6P62333 389 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 SMTNL2Q2TAL5 461 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 FBXO16Q8IX29 292 aaPredicted RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 FAM71DQ8N9W8 422 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 RNF217Q8TC41 542 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 SLC26A7Q8TE54 656 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 SLC4A9Q96Q91 983 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 DDX4Q9NQI0 724 aaKnown RBP14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 RALBP11234 206 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 LHX1P48742 406 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 CLCN3P51790 818 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 KCNA1Q09470 495 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 PTK2BQ14289 1009 aa14.01□□□□□ -0.17
CHRNA4-202ENST00000463705 ARHGAP15Q53QZ3 475 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms