RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 MPP5Q8N3R9 675 aa5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 ASB10Q8WXI3 467 aa5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 MS4A7Q9GZW8 240 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 CHST8Q9H2A9 424 aa5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 MMRN2Q9H8L6 949 aa5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 TBC1D30Q9Y2I9 924 aa5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 HS3ST3A1Q9Y663 406 aa5.55□□□□□ -1.52
HMGB3P6-201ENST00000444896 MBD3L4A6NDZ8 208 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 MBD3L3A6NE82 208 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 NPIPB8E9PQR5 432 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 MYO1CO00159 1063 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 FOXN3O00409 490 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 ZNF202O95125 648 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 IL18RAPO95256 599 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 IL1R1P14778 569 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 TSHRP16473 764 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 NPTX2P47972 431 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 NDUFV1P49821 464 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 HNRNPMP52272 730 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 RHBDL3P58872 404 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 LILRA4P59901 499 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 GUCY1B3Q02153 619 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 IFIT5Q13325 482 aaKnown RBP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 FAM109AQ8N4B1 249 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 PROKR1Q8TCW9 393 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 ELAC2Q9BQ52 826 aaKnown RBP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 TMPRSS5Q9H3S3 457 aa5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 RGS17Q9UGC6 210 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P6-201ENST00000444896 COL4A3Q01955 1670 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 PIPSLA2A3N6 862 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 POM121BA6NF01 834 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 F5H697 171 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 NCK2O43639 380 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 SOAT2O75908 522 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 MT-ND5P03915 603 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 ADH4P08319 380 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 ATXN1LP0C7T5 689 aaKnown RBP5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 CYP2C9P11712 490 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 MCM7P33993 719 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 ABHD18Q0P651 414 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 HDAC1Q13547 482 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 SLC44A4Q53GD3 710 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 CRIP3Q6Q6R5 217 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 TMEM108Q6UXF1 575 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 COLGALT2Q8IYK4 626 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 SLC30A5Q8TAD4 765 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 RAPGEF4Q8WZA2 1011 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 SNX19Q92543 992 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 GJA10Q969M2 543 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 RIPOR3Q96MK2 946 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 MOGAT1Q96PD6 335 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 MYD88Q99836 296 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 WDR11Q9BZH6 1224 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 AMBRA1Q9C0C7 1298 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 SERHL2Q9H4I8 314 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 INTS13Q9NVM9 706 aa5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P6-201ENST00000444896 TRGV11A0A075B6L2 103 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 RASA4BC9J798 803 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 hCG_1984214I3L0E3 225 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 RASA4O43374 803 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 PPFIA4O75335 1185 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 PARP1P09874 1014 aaKnown RBP5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 TXNP10599 105 aaKnown RBP5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 XRCC6P12956 609 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 ITGALP20701 1170 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 KLRC1P26715 233 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 ZEB1P37275 1124 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 STT3AP46977 705 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 LOXL3P58215 753 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 RBM20Q5T481 1227 aaKnown RBP5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 VPS53Q5VIR6 699 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 KLHDC7AQ5VTJ3 777 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 KCNV1Q6PIU1 500 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 UNC13DQ70J99 1090 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 SRLQ86TD4 932 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 DPP9Q86TI2 863 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 LIX1LQ8IVB5 337 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 Q8N1X5 172 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 LNX2Q8N448 690 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 ATP11CQ8NB49 1132 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 SPSB4Q96A44 273 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 SNX22Q96L94 193 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 SGCZQ96LD1 299 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 OSBPL9Q96SU4 736 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 STK31Q9BXU1 1019 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 PNPLA8Q9NP80 782 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 XPNPEP3Q9NQH7 507 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 GJB4Q9NTQ9 266 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 MRPS17Q9Y2R5 130 aaKnown RBP5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 PAXBP1Q9Y5B6 917 aa5.52□□□□□ -1.53
HMGB3P6-201ENST00000444896 A0A0B4J269 797 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 IFIT2P09913 472 aaKnown RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 SRGNP10124 158 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 PPP3CBP16298 524 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 MAKP20794 623 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms