RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 LOC100653049A0A140TA62 436 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 FSCN2O14926 492 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 BUD23O43709 281 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 ATP9BO43861 1147 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 PEX1O43933 1283 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 CIB2O75838 187 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 KRT34O76011 436 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 STT3AP46977 705 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 ARSEP51690 589 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 PTK6Q13882 451 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 ZCCHC23Q6ZST2 131 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 ZC3H3Q8IXZ2 948 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 ZNF276Q8N554 614 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 GDPD5Q8WTR4 605 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 SKA1Q96BD8 255 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 AGAP3Q96P47 875 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 P2RX7Q99572 595 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 EBF4Q9BQW3 602 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 INIPQ9NRY2 104 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 DNPEPQ9ULA0 475 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 FRMD4BQ9Y2L6 1034 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 H3BSA7 217 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 DKC1O60832 514 aaKnown RBP eCLIP11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 FAM155BO75949 473 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 FAM13AO94988 1023 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 BCRP11274 1271 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 CRABP2P29373 138 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 UBXN2AP68543 259 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 PASD1Q8IV76 773 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 EPS8L1Q8TE68 723 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 PRPF18Q99633 342 aaKnown RBP11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
SEC61A1-202ENST00000424880 C15orf38-AP3S2A0A0A6YYH1 394 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 PRPF4O43172 522 aaKnown RBP eCLIP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TOP3BO95985 862 aaKnown RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 USH1GQ495M9 461 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 HSF5Q4G112 596 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 KLHL35Q6PF15 583 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 ARPINQ7Z6K5 226 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TMPRSS6Q8IU80 811 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 CSRNP1Q96S65 589 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TMEM121Q9BTD3 319 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 ATAD5Q96QE3 1844 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 EML1O00423 815 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TFAP2AP05549 437 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 FDX1P10109 184 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 HOXA13P31271 388 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 DYNLT1P63172 113 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 MAP3K10Q02779 954 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 MSS51Q4VC12 460 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 PDSS2Q86YH6 399 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 CPNE9Q8IYJ1 553 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 MMP19Q99542 508 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 EPB41L1Q9H4G0 881 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 PRDM16Q9HAZ2 1276 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 LY75O60449 1722 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 KDM3AQ9Y4C1 1321 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TRIM43BA6NCK2 446 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 RGL2O15211 777 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 CLPTM1O96005 669 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 GJA8P48165 433 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 ACTR3P61158 418 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 FOLH1Q04609 750 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 NFIXQ14938 502 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 PDK1Q15118 436 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 MYLK3Q32MK0 819 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 C3orf62Q6ZUJ4 267 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 PI4K2AQ9BTU6 479 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 UBAP1Q9NZ09 502 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
SEC61A1-202ENST00000424880 MYH11P35749 1972 aa11.83□□□□□ -0.51
SEC61A1-202ENST00000424880 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 LPXNO60711 386 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 GGPS1O95749 300 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 KRT5P13647 590 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 GTF2H1P32780 548 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 TAS2R40P59535 323 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 GPX6P59796 221 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 FMO1Q01740 532 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 KIF22Q14807 665 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 TLR1Q15399 786 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 ANKDD1AQ495B1 522 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 C6orf163Q5TEZ5 329 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms