RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 REXO1L1PQ8IX06 675 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 FBXO16Q8IX29 292 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 HS6ST3Q8IZP7 471 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 NDUFAF2Q8N183 169 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 USP33Q8TEY7 942 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 TFB1MQ8WVM0 346 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 NCLNQ969V3 563 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 OTULINQ96BN8 352 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PNKPQ96T60 521 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 TMEM121Q9BTD3 319 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 KLC4Q9NSK0 619 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PCMTD2Q9NV79 361 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 SUN2Q9UH99 717 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 NOTCH3Q9UM47 2321 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 A0A1W2PQJ5 194 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TMEM120BA0PK00 339 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 FAM47DPA6NHR8 397 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ASB14A6NK59 587 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 KPNA7A9QM74 516 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TBX3O15119 743 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 MAGEB2O15479 319 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CYTH3O43739 400 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 HBP1O60381 514 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 RPS6KA5O75582 802 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CD4P01730 458 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 FAM200BP0CF97 657 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CYP11B1P15538 503 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TCN1P20061 433 aaPredicted RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 HSD17B3P37058 310 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 RAP1GAPP47736 663 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CDH8P55286 799 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TMED1Q13445 227 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ZNF235Q14590 738 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TAF1CQ15572 869 aaPredicted RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 GPRC5AQ8NFJ5 357 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ZNF473Q8WTR7 871 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 SCFD2Q8WU76 684 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 FAM167BQ9BTA0 163 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TSPYL2Q9H2G4 693 aaPredicted RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 SPON1Q9HCB6 807 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 DPP3Q9NY33 737 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 BFARQ9NZS9 450 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 KIF17Q9P2E2 1029 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 SLC13A4Q9UKG4 626 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 HPSEQ9Y251 543 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 MRPL42Q9Y6G3 142 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 BCL9O00512 1426 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 SLC16A3O15427 465 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 ASAP2O43150 1006 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 IL18RAPO95256 599 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 GH1P01241 217 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CYP2C19P33261 490 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 NPTX2P47972 431 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ITGA8P53708 1063 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 SEC24CP53992 1094 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 RAD23BP54727 409 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 VEPH1Q14D04 833 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TRPM8Q7Z2W7 1104 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CBWD2Q8IUF1 395 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ZFPM1Q8IX07 1006 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 SCFD1Q8WVM8 642 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ANKRD7Q92527 254 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 SEPT5Q99719 369 aaPredicted RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 KATNAL1Q9BW62 490 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 EDEM3Q9BZQ6 932 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 RNF19AQ9NV58 838 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 NOP53Q9NZM5 478 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 UVRAGQ9P2Y5 699 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 MED13LQ71F56 2210 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 SPATA31A6Q5VVP1 1343 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 EIF3HO15372 352 aaKnown RBP eCLIP3.4□□□□□ -1.86
KNL1-202ENST00000399668 ENTPD3O75355 529 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 LMNAP02545 664 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 RBP3P10745 1247 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 MCF2P10911 925 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 FGFR2P21802 821 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 MAGEA4P43358 317 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 AARSP49588 968 aaKnown RBP eCLIP3.4□□□□□ -1.86
KNL1-202ENST00000399668 CLCN3P51790 818 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ARHGDIAP52565 204 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CSE1LP55060 971 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 EVX2Q03828 476 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 PDAP1Q13442 181 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 STAT4Q14765 748 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 KYNUQ16719 465 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 KYAT1Q16773 422 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CENPPQ6IPU0 288 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 LRRC8EQ6NSJ5 796 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 NYAP1Q6ZVC0 841 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 TAS2R42Q7RTR8 314 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 EFHBQ8N7U6 833 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 IPMKQ8NFU5 416 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 PTPRN2Q92932 1015 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 CCDC90BQ9GZT6 254 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 LACRTQ9GZZ8 138 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 AGO4Q9HCK5 861 aaKnown RBP3.4□□□□□ -1.86
KNL1-202ENST00000399668 NYAP2Q9P242 653 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 ARHGAP26Q9UNA1 814 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms