RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 TUBA1BP68363 451 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 STX4Q12846 297 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF568Q3ZCX4 644 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TUBA1AQ71U36 451 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 LINC00523Q86TU6 105 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 COMMD8Q9NX08 183 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ATXN10Q9UBB4 475 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PSMB9P28065 219 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PTGS2P35354 604 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PPP3CCP48454 512 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 XRCC4Q13426 336 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 GTF2H3Q13889 308 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 EFR3AQ14156 821 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ATP13A5Q4VNC0 1218 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 LRRC24Q50LG9 513 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 FAM98BQ52LJ0 330 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 FRMD5Q7Z6J6 570 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 RNF25Q96BH1 459 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TOPORSQ9NS56 1045 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CCNA2P20248 432 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 RCAN1P53805 252 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 STK4Q13043 487 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF211Q13398 564 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 NEDD8Q15843 81 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ZMYM1Q5SVZ6 1142 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ULK2Q8IYT8 1036 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 DDX18Q9NVP1 670 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 EIF3LQ9Y262 564 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CARD8Q9Y2G2 431 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 NCAPD2Q15021 1401 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 LRRIQ1Q96JM4 1722 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PNMA6FA0A0J9YX94 578 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 DFFAO00273 331 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ZBTB39O15060 712 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF284Q2VY69 593 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ANKRD40Q6AI12 368 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 C4orf33Q8N1A6 199 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 UXS1Q8NBZ7 420 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SKA1Q96BD8 255 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 C11orf70Q9BRQ4 267 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 AFF4Q9UHB7 1163 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SAGE2PA6NJ88 616 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TAF5LO75529 589 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 POU4F1Q01851 419 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 KCTD2Q14681 263 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PDK1Q15118 436 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ANO4Q32M45 955 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 FAM102AQ5T9C2 384 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TTC27Q6P3X3 843 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 EXD1Q8NHP7 514 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PKP3Q9Y446 797 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 KDM5CP41229 1560 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 AP1G2O75843 785 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SEMA3DO95025 777 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 NNMTP40261 264 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CRKP46108 304 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 RAD51Q06609 339 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ABRAXAS1Q6UWZ7 409 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ELMOD1Q8N336 334 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 KBTBD8Q8NFY9 601 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 FNIP1Q8TF40 1166 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ENTPD7Q9NQZ7 604 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 BAIAP2Q9UQB8 552 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 USP27XA6NNY8 438 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 M0R2C6 588 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 GNB5O14775 395 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 NDUFS3O75489 264 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PRKAR1AP10644 381 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 HSD17B3P37058 310 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 AP3M2P53677 418 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC153Q494R4 210 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 AKIRIN2Q53H80 203 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF333Q96JL9 665 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 DYRK4Q9NR20 520 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 LATS2Q9NRM7 1088 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CD274Q9NZQ7 290 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 WHRNQ9P202 907 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ATPIF1Q9UII2 106 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 A0A087WWV3 80 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 F8W810 466 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 MYL12BO14950 172 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 OLR1P78380 273 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CCNA1P78396 465 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ALDH6A1Q02252 535 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SLC34A1Q06495 639 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TRAP1Q12931 704 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 EIF2B5Q13144 721 aaKnown RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SEL1L3Q68CR1 1132 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 EPHX4Q8IUS5 362 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 MMGT1Q8N4V1 131 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 L3MBTL3Q96JM7 780 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SENP7Q9BQF6 1050 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SLITRK2Q9H156 845 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 EHD3Q9NZN3 535 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PCDHB6Q9Y5E3 794 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 SLCO1B7G3V0H7 640 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 NPEPPSP55786 919 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TPI1P60174 286 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CENPCQ03188 943 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PIGHQ14442 188 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms