RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 TMEM161BQ8NDZ6 487 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 SPATA4Q8NEY3 305 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 FBXL18Q96ME1 805 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 PTPRHQ9HD43 1115 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 MAN1C1Q9NR34 630 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 CHST7Q9NS84 486 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 HPCAL4Q9UM19 191 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 SSX2IPQ9Y2D8 614 aa11.86□□□□□ -0.51
APOBEC3B-201ENST00000333467 MYO10Q9HD67 2058 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 UBE4BO95155 1302 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 DOCK6Q96HP0 2047 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 MYH10P35580 1976 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 GTPBP10A4D1E9 387 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 ERICH4A6NGS2 130 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 OPA1O60313 960 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 KRT18P05783 430 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 MAPTP10636 758 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 LMAN1P49257 510 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 KCNMA1Q12791 1236 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 STRN3Q13033 797 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 USP41Q3LFD5 358 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 RTP2Q5QGT7 225 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 KIAA0319Q5VV43 1072 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 ALS2CLQ60I27 953 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 TMC5Q6UXY8 1006 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 GBP6Q6ZN66 633 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 HPS3Q969F9 1004 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 CAVIN3Q969G5 261 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 SNX27Q96L92 541 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 GOLGA2P5Q9HBQ8 144 aa11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 TOPORSQ9NS56 1045 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
APOBEC3B-201ENST00000333467 ZNF318Q5VUA4 2279 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 PRR33A8MZF0 331 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 GOLGA8KD6RF30 607 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 K7ENM7 598 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 TADA2AO75478 443 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 GLUD1P00367 558 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 MCF2P10911 925 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 MTHFRP42898 656 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 SMTNP53814 917 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 YARSP54577 528 aaKnown RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 HNRNPH2P55795 449 aaKnown RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 ASIC2Q16515 512 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 PRSS55Q6UWB4 352 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 VPS36Q86VN1 386 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 SCFD1Q8WVM8 642 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 CALR3Q96L12 384 aaKnown RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 RIPOR3Q96MK2 946 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 TCHPQ9BT92 498 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 SELENOOQ9BVL4 669 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 LSM14BQ9BX40 385 aaKnown RBP11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 RXFP1Q9HBX9 757 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 STIM2Q9P246 746 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 INTUQ9ULD6 942 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 CAPN6Q9Y6Q1 641 aa11.84□□□□□ -0.51
APOBEC3B-201ENST00000333467 C2CD4DB7Z1M9 353 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 EPHB6O15197 1021 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 SRGAP2O75044 1071 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 TOM1L1O75674 476 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 NOL4O94818 638 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 FAM13AO94988 1023 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 MOCS3O95396 460 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 MYBP10242 640 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 EPB41P11171 864 aaKnown RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 RPL17P18621 184 aaKnown RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 PRKCIP41743 596 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 CLCNKBP51801 687 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZNF131P52739 623 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 CREMQ03060 361 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 SOX4Q06945 474 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 ADAM9Q13443 819 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 KNOP1Q1ED39 458 aaKnown RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 EPM2AIP1Q7L775 607 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 C3orf58Q8NDZ4 430 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 BICD1Q96G01 975 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZBTB45Q96K62 511 aaPredicted RBP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 MKNK1Q9BUB5 465 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 PARVGQ9HBI0 331 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 OLFML3Q9NRN5 406 aa11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.83□□□□□ -0.52
APOBEC3B-201ENST00000333467 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms