RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RAD9BQ6WBX8 426 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CYFIP1Q7L576 1253 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 LRRC34Q8IZ02 419 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 RIN3Q8TB24 985 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 MYCBPAPQ8TBZ2 947 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CASP10Q92851 521 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ARHGEF26Q96DR7 871 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 OMA1Q96E52 524 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 KAZALD1Q96I82 304 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 PNKPQ96T60 521 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 C17orf80Q9BSJ5 609 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 GABBR1Q9UBS5 961 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 AGO2Q9UKV8 859 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 FARP1Q9Y4F1 1045 aaPredicted RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 SESN1Q9Y6P5 492 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 AP3B1O00203 1094 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 TDP2O95551 362 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 SERPIND1P05546 499 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ATP4AP20648 1035 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC29A2Q14542 456 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ITIH4Q14624 930 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 BTBD8Q5XKL5 378 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 PPP1R14BQ96C90 147 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 DCUN1D1Q96GG9 259 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ANKZF1Q9H8Y5 726 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 PDXKO00764 312 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 LCP1P13796 627 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 PDGFRAP16234 1089 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 KCNJ1P48048 391 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CSTF3Q12996 717 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 GTF2H3Q13889 308 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CHI3L2Q15782 390 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIM71Q2Q1W2 868 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 SWSAP1Q6NVH7 229 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ERP44Q9BS26 406 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 LXNQ9BS40 222 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 MRPL4Q9BYD3 311 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 C2orf40Q9H1Z8 148 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ABCB11O95342 1321 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 NMT2O60551 498 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 SPAG6O75602 509 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 ASNSP08243 561 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 SRGNP10124 158 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 AKR1B1P15121 316 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 NUDT2P50583 147 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 COA1Q9GZY4 146 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 POLR3FQ9H1D9 316 aaPredicted RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 PARP4Q9UKK3 1724 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-201ENST00000291547 EVPLLA8MZ36 301 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 NDUFS3O75489 264 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 KHDRBS2Q5VWX1 349 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 FASTKD5Q7L8L6 764 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 MB21D2Q8IYB1 491 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 RBBP8Q99708 897 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 COQ7Q99807 217 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 FAM118BQ9BPY3 351 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 STK33Q9BYT3 514 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 PLEKHA5Q9HAU0 1116 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 PYGMP11217 842 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 NQO1P15559 274 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 FMR1Q06787 632 aaKnown RBP eCLIP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 OVGP1Q12889 678 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 KRR1Q13601 381 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 MTFR1Q15390 333 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC15A2Q16348 729 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 MFSD4BQ5TF39 518 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 CPA5Q8WXQ8 436 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 HPS3Q969F9 1004 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIM62Q9BVG3 475 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ISCUQ9H1K1 167 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 UBAP1Q9NZ09 502 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 PKP3Q9Y446 797 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 CYTH3O43739 400 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 TSC22D2O75157 780 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 SFNP31947 248 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ITGA8P53708 1063 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 RCAN1P53805 252 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 ADRM1Q16186 407 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 WDR72Q3MJ13 1102 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 DALRD3Q5D0E6 543 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 MEI1Q5TIA1 1274 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 TTC30AQ86WT1 665 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 RTKN2Q8IZC4 609 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 SH3RF3Q8TEJ3 882 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 USP33Q8TEY7 942 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 CATSPER2Q96P56 530 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 SENP7Q9BQF6 1050 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 GINS4Q9BRT9 223 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIM9Q9C026 710 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
PKNOX1-201ENST00000291547 DYTNA2CJ06 578 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms