RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Trmt11Q9CWH5 460 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Snx29Q9D3S3 818 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Znf318Q99PP2 2237 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Eno1P17182 434 aaKnown RBP17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Cdc25cP48967 447 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Mpzl3Q3V3F6 237 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 EsrrbQ61539 433 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Slc35f6Q8VE96 372 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Mkrn1Q9QXP6 481 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Scn11aQ9R053 1765 aa17.13■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Slc6a21A0A1B0GSD2 748 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Pdzrn4E9PUZ9 1014 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Taf4bG5E8Z2 855 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 B020004C17RikJ3QP07 232 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 SpibO35906 267 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 H2afxP27661 143 aaKnown RBP17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Acsl1P41216 699 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Papd7Q6PB75 542 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Lrfn2Q80TG9 788 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Robo4Q8C310 1012 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Mob2Q8VI63 235 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Usp26Q99MX1 835 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Sept6Q9R1T4 434 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Bdp1Q571C7 2467 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gm1758F6VZZ1 202 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gm21962L7N280 338 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gnrh1P13562 90 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Sult1d1Q3UZZ6 295 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Cspg5Q71M36 566 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Taf2Q8C176 1104 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Cgref1Q8R1U2 281 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Snrnp25Q8VIK1 123 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Zmynd10Q99ML0 440 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Zc3h4Q6ZPZ3 1304 aaKnown RBP17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Scn3aA2ASI5 1947 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Psma2P49722 234 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Usp10P52479 792 aaKnown RBP17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Irx1P81068 480 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Mansc4Q3UU94 337 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Six2Q62232 296 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Dclk2Q6PGN3 756 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Dars2Q8BIP0 653 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Cdk17Q8K0D0 523 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Rnf208Q8K0W3 265 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Golga1Q9CW79 758 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Katnbl1Q9CWJ3 299 aa17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Noc2lQ9WV70 747 aaKnown RBP17.12■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Olfr743L7N1Y2 311 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Brcc3P46737 291 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 ZbbxQ0P5X5 716 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Rad9bQ6WBX7 403 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Zfyve28Q6ZPK7 905 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Cttnbp2nlQ99LJ0 638 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Atrnl1Q6A051 1378 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Arhgap42B2RQE8 841 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Atp13a5Q3TYU2 1216 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Trnp1Q80ZI1 223 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Fbxo43Q8CDI2 640 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Tti1Q91V83 1085 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 NonoQ99K48 473 aaKnown RBP17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Vps33aQ9D2N9 598 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Bfsp1A2AMT1 669 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Mmrn1B2RPV6 1210 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gm7694J3QNH8 270 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 PurbO35295 324 aaKnown RBP17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gjd2O54851 321 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Ess2O70279 479 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Eif3eP60229 445 aaKnown RBP17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 SnrpfP62307 86 aaKnown RBP17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Nr2e1Q64104 385 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Lilrb4Q64281 335 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Dhx32Q8BZS9 744 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Unc45bQ8CGY6 931 aaKnown RBP17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Rab11fip1Q9D620 645 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Znf654Q9DAU9 571 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Serpina1fQ9DCQ7 411 aa17.11■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Polr2aP08775 1970 aaKnown RBP17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 AspgA0JNU3 564 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Atp2c2A7L9Z8 944 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gm4302E9PX25 294 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Ptgs2Q05769 604 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Agxt2Q3UEG6 513 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Ubap2lQ80X50 1107 aaKnown RBP17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 FsbpQ8BKE5 299 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Snx17Q8BVL3 470 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Brat1Q8C3R1 822 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 1700123K08RikQ9D991 295 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 PtprcP06800 1291 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 SarsP26638 512 aaKnown RBP17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 ProcP33587 460 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Ccr5P51682 354 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Nop9Q8BMC4 636 aaKnown RBP17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Fsd1lQ8BYN5 507 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 EmcnQ9R0H2 261 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Angptl3Q9R182 455 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Dennd5bA2RSQ0 1274 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Mrgprb1Q3UG61 350 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Fra10ac1Q8BP78 315 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Gimap3Q99MI6 301 aa17.1■□□□□ 0.33
Ubp1-202ENSMUST00000084885 Ddx47Q9CWX9 455 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms