RNA–Protein interactions for RNA: tC(GCA)B

tC(GCA)B, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)B, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)BtC(GCA)B RPS18AP0CX55 146 aaKnown RBP1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B RPS18BP0CX56 146 aaPredicted RBP1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B RNP1P32385 249 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B NPL6P32832 435 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B PPQ1P32945 549 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B CSH1P38287 376 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B AIM19P40502 157 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B NIF3P53081 288 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B VHT1P53241 593 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B HST4P53688 370 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B FRQ1Q06389 190 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B NGL1Q08213 363 aaKnown RBP1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B AYT1Q12226 474 aa1.88□□□□□ -2.11
tC(GCA)BtC(GCA)B PIS1P06197 220 aaKnown RBP1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B AHC2P25649 128 aa1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B TIR2P33890 251 aa1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B DIM1P41819 318 aaKnown RBP1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B ASI2P53895 289 aa1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B TMA23Q03525 211 aa1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B YMR253CQ04835 414 aa1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B DCS1Q06151 350 aa1.87□□□□□ -2.11
tC(GCA)BtC(GCA)B YEL009C-AA0A023PZF2 135 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B YMR316C-AI2HB70 103 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B HIS3P06633 220 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B ARO2P28777 376 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B HOM6P31116 359 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B VMA8P32610 256 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B RPL32P38061 130 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B LSM2P38203 95 aaKnown RBP1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B ATG27P46989 271 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B MGA1P53050 456 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B SDH7Q04401 133 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B YMR320WQ04897 101 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B YLR042CQ07990 161 aa1.86□□□□□ -2.11
tC(GCA)BtC(GCA)B CDC31P06704 161 aaKnown RBP1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B DFR1P07807 211 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
tC(GCA)BtC(GCA)B CDC34P14682 295 aa1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B EMP24P32803 203 aaKnown RBP1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B SHB17P36136 271 aaKnown RBP1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B NVJ1P38881 321 aa1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B BFR1P38934 470 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
tC(GCA)BtC(GCA)B YAE1P47118 141 aaPredicted RBP1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B SDS23P53172 527 aa1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B ODC1Q03028 310 aa1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B TLG1Q03322 224 aa1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B PAM18Q07914 168 aa1.85□□□□□ -2.11
tC(GCA)BtC(GCA)B VAR1P02381 398 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B FMT1P32785 401 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B MRPL28P36527 147 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B SFT2P38166 215 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B HTD2P38790 280 aaKnown RBP1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B HCH1P53834 153 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B SNA2P56508 79 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B RAV2Q03956 351 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B UPS3Q04006 179 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B IES3Q12345 250 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B TRM10Q12400 293 aa1.84□□□□□ -2.11
tC(GCA)BtC(GCA)B MDH1P17505 334 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
tC(GCA)BtC(GCA)B CDC10P25342 322 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B RPL16BP26785 198 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B RPL14AP36105 138 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B YBR013CP38215 129 aa1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B RPL14BP38754 138 aaKnown RBP1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B YJR096WP47137 282 aa1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B YLR031WQ07978 186 aa1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B YPR145C-AQ2V2P0 78 aa1.83□□□□□ -2.12
tC(GCA)BtC(GCA)B MBB1P39534 108 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B PEX22P39718 180 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B YER076CP40049 302 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B MSS2P40990 351 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B RPL37BP51402 88 aaKnown RBP1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B CAF40P53829 373 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B ATG41Q12048 136 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B ISN1Q99312 450 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B PET20Q99373 253 aa1.82□□□□□ -2.12
tC(GCA)BtC(GCA)B FCY2P17064 533 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B FAR1P21268 830 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B POP8P38208 133 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B TY1A-MR1Q04215 440 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B YLR194CQ05777 254 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B SYM1Q06563 197 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B DGA1Q08650 418 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B SCP1Q08873 200 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B KTI11Q3E840 82 aa1.81□□□□□ -2.12
tC(GCA)BtC(GCA)B QCR7P00128 127 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B RPL16AP26784 199 aaKnown RBP1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B FPR2P32472 135 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B YCH1P42937 148 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B BNA6P43619 295 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B TPN1P53099 579 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B ORM1P53224 222 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B ISU1Q03020 165 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B MAK3Q03503 176 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B YLR224WQ05947 369 aa1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B YOR283WQ12040 230 aaKnown RBP1.8□□□□□ -2.12
tC(GCA)BtC(GCA)B YLR156WP0CE96 114 aa1.79□□□□□ -2.12
tC(GCA)BtC(GCA)B YLR159WP0CE97 114 aa1.79□□□□□ -2.12
tC(GCA)BtC(GCA)B YLR161WP0CE98 114 aa1.79□□□□□ -2.12
tC(GCA)BtC(GCA)B DDI2P0CH63 225 aa1.79□□□□□ -2.12
tC(GCA)BtC(GCA)B DDI3P0CH64 225 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms