RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W TVP15Q03860 143 aa3.11□□□□□ -1.91
SCD6YPR129W YMR087WQ04299 284 aa3.11□□□□□ -1.91
SCD6YPR129W YMR090WQ04304 227 aaKnown RBP3.11□□□□□ -1.91
SCD6YPR129W FCF1Q05498 189 aaPredicted RBP3.11□□□□□ -1.91
SCD6YPR129W RRG7Q08774 242 aaPredicted RBP3.11□□□□□ -1.91
SCD6YPR129W PPT2Q12036 173 aa3.11□□□□□ -1.91
SCD6YPR129W YLR049CQ12110 428 aa3.11□□□□□ -1.91
SCD6YPR129W RLM1Q12224 676 aa3.11□□□□□ -1.91
SCD6YPR129W IGO2Q9P305 131 aa3.11□□□□□ -1.91
SCD6YPR129W TY4B-HP0C2J7 1802 aa3.11□□□□□ -1.91
SCD6YPR129W MRS1P07266 363 aa3.1□□□□□ -1.91
SCD6YPR129W YAR066WP0CX18 203 aa3.1□□□□□ -1.91
SCD6YPR129W YHR214WP0CX19 203 aa3.1□□□□□ -1.91
SCD6YPR129W MIG1P27705 504 aa3.1□□□□□ -1.91
SCD6YPR129W ERG24P32462 438 aaKnown RBP3.1□□□□□ -1.91
SCD6YPR129W YKR070WP36151 352 aaKnown RBP3.1□□□□□ -1.91
SCD6YPR129W YBR063CP38083 404 aa3.1□□□□□ -1.91
SCD6YPR129W ASP1P38986 381 aaPredicted RBP3.1□□□□□ -1.91
SCD6YPR129W EMC5P40540 141 aa3.1□□□□□ -1.91
SCD6YPR129W EGT2P42835 1041 aa3.1□□□□□ -1.91
SCD6YPR129W BAT2P47176 376 aaKnown RBP3.1□□□□□ -1.91
SCD6YPR129W CAX4P53223 239 aa3.1□□□□□ -1.91
SCD6YPR129W RNH201P53942 307 aa3.1□□□□□ -1.91
SCD6YPR129W YNL033WP53964 284 aa3.1□□□□□ -1.91
SCD6YPR129W YNL019CP53975 284 aa3.1□□□□□ -1.91
SCD6YPR129W LSM3P57743 89 aaKnown RBP3.1□□□□□ -1.91
SCD6YPR129W YPL039WQ03080 316 aa3.1□□□□□ -1.91
SCD6YPR129W RAF1Q06891 181 aa3.1□□□□□ -1.91
SCD6YPR129W RPS10AQ08745 105 aaPredicted RBP3.1□□□□□ -1.91
SCD6YPR129W RFM1Q12192 310 aa3.1□□□□□ -1.91
SCD6YPR129W IZH2Q12442 317 aa3.1□□□□□ -1.91
SCD6YPR129W YDL007C-AQ2V2Q0 85 aa3.1□□□□□ -1.91
SCD6YPR129W YOR338WQ99326 363 aa3.1□□□□□ -1.91
SCD6YPR129W MLP1Q02455 1875 aaKnown RBP3.09□□□□□ -1.91
SCD6YPR129W COX5AP00424 153 aa3.09□□□□□ -1.91
SCD6YPR129W OPI3P05375 206 aa3.09□□□□□ -1.91
SCD6YPR129W RPL20AP0CX23 172 aaKnown RBP3.09□□□□□ -1.91
SCD6YPR129W RPL20BP0CX24 172 aaPredicted RBP3.09□□□□□ -1.91
SCD6YPR129W PUP3P25451 205 aaKnown RBP3.09□□□□□ -1.91
SCD6YPR129W LRE1P25579 583 aaKnown RBP3.09□□□□□ -1.91
SCD6YPR129W URA10P30402 227 aa3.09□□□□□ -1.91
SCD6YPR129W MSN2P33748 704 aa3.09□□□□□ -1.91
SCD6YPR129W PHO89P38361 574 aa3.09□□□□□ -1.91
SCD6YPR129W MST28P39552 234 aa3.09□□□□□ -1.91
SCD6YPR129W NSA2P40078 261 aaKnown RBP3.09□□□□□ -1.91
SCD6YPR129W CYB5P40312 120 aa3.09□□□□□ -1.91
SCD6YPR129W TIS11P47977 285 aa3.09□□□□□ -1.91
SCD6YPR129W YGR164WP53291 111 aa3.09□□□□□ -1.91
SCD6YPR129W IRC15Q02733 499 aa3.09□□□□□ -1.91
SCD6YPR129W YML079WQ03629 201 aa3.09□□□□□ -1.91
SCD6YPR129W BET5Q03630 159 aa3.09□□□□□ -1.91
SCD6YPR129W YMR082CQ04276 118 aa3.09□□□□□ -1.91
SCD6YPR129W RPC11Q04307 110 aaPredicted RBP3.09□□□□□ -1.91
SCD6YPR129W RRS1Q08746 203 aaKnown RBP3.09□□□□□ -1.91
SCD6YPR129W YOR097CQ12274 175 aaPredicted RBP3.09□□□□□ -1.91
SCD6YPR129W YOR093CQ12275 1648 aa3.08□□□□□ -1.92
SCD6YPR129W URB1P34241 1764 aaKnown RBP3.08□□□□□ -1.92
SCD6YPR129W YRF1-3P0CX14 1859 aa3.08□□□□□ -1.92
SCD6YPR129W YRF1-7P0CX15 1859 aa3.08□□□□□ -1.92
SCD6YPR129W YRF1-6P53819 1859 aa3.08□□□□□ -1.92
SCD6YPR129W TRP1P00912 224 aa3.08□□□□□ -1.92
SCD6YPR129W POR1P04840 283 aaKnown RBP3.08□□□□□ -1.92
SCD6YPR129W MRS3P10566 314 aa3.08□□□□□ -1.92
SCD6YPR129W MSI1P13712 422 aa3.08□□□□□ -1.92
SCD6YPR129W MRP21P38175 177 aa3.08□□□□□ -1.92
SCD6YPR129W YNL198CP40166 100 aa3.08□□□□□ -1.92
SCD6YPR129W YFR054CP43622 192 aa3.08□□□□□ -1.92
SCD6YPR129W EMC4P53073 190 aa3.08□□□□□ -1.92
SCD6YPR129W CPD1P53314 239 aa3.08□□□□□ -1.92
SCD6YPR129W YNL234WP53857 426 aa3.08□□□□□ -1.92
SCD6YPR129W NUP100Q02629 959 aa3.08□□□□□ -1.92
SCD6YPR129W NMA1Q06178 401 aaKnown RBP3.08□□□□□ -1.92
SCD6YPR129W SHH4Q06236 168 aa3.08□□□□□ -1.92
SCD6YPR129W HRT1Q08273 121 aa3.08□□□□□ -1.92
SCD6YPR129W YPL162CQ12042 273 aa3.08□□□□□ -1.92
SCD6YPR129W YDL157CQ12082 118 aa3.08□□□□□ -1.92
SCD6YPR129W YPS3Q12303 508 aa3.08□□□□□ -1.92
SCD6YPR129W SME1Q12330 94 aaPredicted RBP3.08□□□□□ -1.92
SCD6YPR129W YLR363W-AQ3E747 85 aa3.08□□□□□ -1.92
SCD6YPR129W YER145C-AA0A023PYF4 145 aa3.07□□□□□ -1.92
SCD6YPR129W RPS2P25443 254 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W YCR085WP25650 117 aa3.07□□□□□ -1.92
SCD6YPR129W QRI5P32344 111 aa3.07□□□□□ -1.92
SCD6YPR129W MTR2P34232 184 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W CCS1P40202 249 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W YJL218WP40892 196 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W YJL213WP40896 331 aa3.07□□□□□ -1.92
SCD6YPR129W OST1P41543 476 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W GPI2P46961 280 aa3.07□□□□□ -1.92
SCD6YPR129W EAF6P47128 113 aa3.07□□□□□ -1.92
SCD6YPR129W HST4P53688 370 aa3.07□□□□□ -1.92
SCD6YPR129W PBP4Q07362 185 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W DGA1Q08650 418 aa3.07□□□□□ -1.92
SCD6YPR129W BSC1Q12140 328 aa3.07□□□□□ -1.92
SCD6YPR129W YPL119C-AQ3E751 87 aa3.07□□□□□ -1.92
SCD6YPR129W NUP188P52593 1655 aaKnown RBP3.07□□□□□ -1.92
SCD6YPR129W TY4B-JP47024 1803 aa3.07□□□□□ -1.92
SCD6YPR129W HEM4P06174 275 aa3.06□□□□□ -1.92
SCD6YPR129W RPL40AP0CH08 128 aaKnown RBP3.06□□□□□ -1.92
SCD6YPR129W RPL40BP0CH09 128 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms