RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W YDR278CQ05612 105 aa2.82□□□□□ -1.96
VPS27YNR006W NEJ1Q06148 342 aa2.82□□□□□ -1.96
VPS27YNR006W FRQ1Q06389 190 aa2.82□□□□□ -1.96
VPS27YNR006W MID2P36027 376 aa2.82□□□□□ -1.96
VPS27YNR006W SHE2P36068 246 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
VPS27YNR006W GVP36P40531 326 aaKnown RBP2.82□□□□□ -1.96
VPS27YNR006W YMR099CQ03161 297 aaKnown RBP2.82□□□□□ -1.96
VPS27YNR006W SAS5Q99314 248 aa2.82□□□□□ -1.96
VPS27YNR006W TY3B-IQ7LHG5 1498 aaKnown RBP2.81□□□□□ -1.96
VPS27YNR006W UTH1P36135 365 aa2.81□□□□□ -1.96
VPS27YNR006W DSK2P48510 373 aa2.81□□□□□ -1.96
VPS27YNR006W SLM2P53955 656 aa2.81□□□□□ -1.96
VPS27YNR006W VPS71Q03433 280 aa2.81□□□□□ -1.96
VPS27YNR006W YLR419WQ06698 1435 aaKnown RBP2.8□□□□□ -1.96
VPS27YNR006W TRM3Q07527 1436 aa2.8□□□□□ -1.96
VPS27YNR006W CPA1P07258 411 aaKnown RBP2.8□□□□□ -1.96
VPS27YNR006W YJL218WP40892 196 aaKnown RBP2.8□□□□□ -1.96
VPS27YNR006W ERJ5P43613 295 aaPredicted RBP2.8□□□□□ -1.96
VPS27YNR006W YGR026WP53217 278 aa2.8□□□□□ -1.96
VPS27YNR006W MPC3P53311 146 aa2.8□□□□□ -1.96
VPS27YNR006W YDR366CP87287 132 aa2.8□□□□□ -1.96
VPS27YNR006W GAL83Q04739 417 aa2.8□□□□□ -1.96
VPS27YNR006W YOR214CQ12282 236 aa2.8□□□□□ -1.96
VPS27YNR006W ATP14Q12349 124 aa2.8□□□□□ -1.96
VPS27YNR006W POR1P04840 283 aaKnown RBP2.79□□□□□ -1.96
VPS27YNR006W RPC19P28000 142 aaKnown RBP2.79□□□□□ -1.96
VPS27YNR006W UGX2P32772 223 aa2.79□□□□□ -1.96
VPS27YNR006W YRA2P36036 203 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
VPS27YNR006W RPS20P38701 121 aaKnown RBP2.79□□□□□ -1.96
VPS27YNR006W YFL012WP43580 148 aa2.79□□□□□ -1.96
VPS27YNR006W PIR5P46999 287 aa2.79□□□□□ -1.96
VPS27YNR006W TIR1P10863 254 aa2.79□□□□□ -1.96
VPS27YNR006W PTC1P35182 281 aa2.79□□□□□ -1.96
VPS27YNR006W YGR039WP53225 103 aa2.79□□□□□ -1.96
VPS27YNR006W HHO1P53551 258 aa2.79□□□□□ -1.96
VPS27YNR006W CNL1Q06333 122 aa2.79□□□□□ -1.96
VPS27YNR006W SLO1Q3E784 85 aa2.79□□□□□ -1.96
VPS27YNR006W RPS1BP23248 255 aaKnown RBP2.78□□□□□ -1.96
VPS27YNR006W MRP49P32388 137 aa2.78□□□□□ -1.96
VPS27YNR006W YHR180WP38868 163 aa2.78□□□□□ -1.96
VPS27YNR006W APS3P47064 194 aa2.78□□□□□ -1.96
VPS27YNR006W SCW10Q04951 389 aa2.78□□□□□ -1.96
VPS27YNR006W YPR063CQ12160 140 aa2.78□□□□□ -1.96
VPS27YNR006W ATP20Q12233 115 aa2.78□□□□□ -1.96
VPS27YNR006W MSW1P04803 379 aa2.77□□□□□ -1.97
VPS27YNR006W HYM1P32464 399 aa2.77□□□□□ -1.97
VPS27YNR006W YKR032WP36127 104 aa2.77□□□□□ -1.97
VPS27YNR006W YBR220CP38318 560 aa2.77□□□□□ -1.97
VPS27YNR006W FKS1P38631 1876 aaKnown RBP2.77□□□□□ -1.97
VPS27YNR006W CGI121Q03705 181 aaKnown RBP2.77□□□□□ -1.97
VPS27YNR006W SDH7Q04401 133 aa2.77□□□□□ -1.97
VPS27YNR006W NSP1P14907 823 aaKnown RBP2.77□□□□□ -1.97
VPS27YNR006W PHO13P19881 312 aa2.77□□□□□ -1.97
VPS27YNR006W MRPL24P36525 258 aaPredicted RBP2.77□□□□□ -1.97
VPS27YNR006W UMP1P38293 148 aa2.77□□□□□ -1.97
VPS27YNR006W DOC1P53068 250 aa2.77□□□□□ -1.97
VPS27YNR006W YGL193CP53097 103 aa2.77□□□□□ -1.97
VPS27YNR006W TIM13P53299 105 aa2.77□□□□□ -1.97
VPS27YNR006W NKP2Q06162 153 aa2.77□□□□□ -1.97
VPS27YNR006W USO1P25386 1790 aa2.76□□□□□ -1.97
VPS27YNR006W KRE5P22023 1365 aa2.76□□□□□ -1.97
VPS27YNR006W YOR304C-AO14468 76 aa2.76□□□□□ -1.97
VPS27YNR006W YHL026CP38740 315 aa2.76□□□□□ -1.97
VPS27YNR006W YHR140WP38842 239 aa2.76□□□□□ -1.97
VPS27YNR006W SPC25P40014 221 aa2.76□□□□□ -1.97
VPS27YNR006W YER084WP40057 128 aa2.76□□□□□ -1.97
VPS27YNR006W NSA2P40078 261 aaKnown RBP2.76□□□□□ -1.97
VPS27YNR006W HPM1P40481 377 aa2.76□□□□□ -1.97
VPS27YNR006W SBH1P52870 82 aa2.76□□□□□ -1.97
VPS27YNR006W BCK1Q01389 1478 aa2.76□□□□□ -1.97
VPS27YNR006W FMP49A0A023PZB3 126 aa2.75□□□□□ -1.97
VPS27YNR006W HSP30P25619 332 aa2.75□□□□□ -1.97
VPS27YNR006W SRP21P32342 167 aa2.75□□□□□ -1.97
VPS27YNR006W SHB17P36136 271 aaKnown RBP2.75□□□□□ -1.97
VPS27YNR006W HTD2P38790 280 aaKnown RBP2.75□□□□□ -1.97
VPS27YNR006W PGD1P40356 397 aa2.75□□□□□ -1.97
VPS27YNR006W GPI2P46961 280 aa2.75□□□□□ -1.97
VPS27YNR006W YNR062CP53748 327 aa2.75□□□□□ -1.97
VPS27YNR006W YKR005CQ02203 525 aa2.75□□□□□ -1.97
VPS27YNR006W MRPS8Q03799 155 aa2.75□□□□□ -1.97
VPS27YNR006W YDR102CQ03864 110 aa2.75□□□□□ -1.97
VPS27YNR006W RUB1Q03919 77 aa2.75□□□□□ -1.97
VPS27YNR006W SYM1Q06563 197 aa2.75□□□□□ -1.97
VPS27YNR006W PRP11Q07350 266 aaPredicted RBP2.75□□□□□ -1.97
VPS27YNR006W SPC3Q12133 184 aa2.75□□□□□ -1.97
VPS27YNR006W DNF3Q12674 1656 aa2.75□□□□□ -1.97
VPS27YNR006W MRPS9P38120 278 aa2.75□□□□□ -1.97
VPS27YNR006W VMA7P39111 118 aa2.75□□□□□ -1.97
VPS27YNR006W YEL028WP39989 153 aa2.75□□□□□ -1.97
VPS27YNR006W EAF6P47128 113 aa2.75□□□□□ -1.97
VPS27YNR006W ARL3Q02804 198 aa2.75□□□□□ -1.97
VPS27YNR006W FSF1Q12029 327 aaKnown RBP2.75□□□□□ -1.97
VPS27YNR006W YLR099W-AQ3E798 87 aa2.75□□□□□ -1.97
VPS27YNR006W RPS23AP0CX29 145 aaKnown RBP2.74□□□□□ -1.97
VPS27YNR006W RPS23BP0CX30 145 aa2.74□□□□□ -1.97
VPS27YNR006W PHO85P17157 305 aa2.74□□□□□ -1.97
VPS27YNR006W SNC2P33328 115 aa2.73□□□□□ -1.97
VPS27YNR006W RPL14AP36105 138 aaKnown RBP2.73□□□□□ -1.97
VPS27YNR006W RRT1P38192 103 aa2.73□□□□□ -1.97
VPS27YNR006W RPL14BP38754 138 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms