RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeastyeast

Gene UBC7, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC7YMR022W MIX14Q04341 121 aa0.38□□□□□ -2.35
UBC7YMR022W FSF1Q12029 327 aaKnown RBP0.38□□□□□ -2.35
UBC7YMR022W ATG40Q99325 256 aa0.38□□□□□ -2.35
UBC7YMR022W SIR2P06700 562 aa0.37□□□□□ -2.35
UBC7YMR022W YBR121C-AP0C5L4 52 aa0.37□□□□□ -2.35
UBC7YMR022W GCN3P14741 305 aa0.37□□□□□ -2.35
UBC7YMR022W APA2P22108 325 aa0.37□□□□□ -2.35
UBC7YMR022W PRX1P34227 261 aaKnown RBP0.37□□□□□ -2.35
UBC7YMR022W CLG1P35190 452 aa0.37□□□□□ -2.35
UBC7YMR022W YHL042WP38729 150 aa0.37□□□□□ -2.35
UBC7YMR022W GIM4P40005 111 aaKnown RBP0.37□□□□□ -2.35
UBC7YMR022W YER121WP40076 114 aa0.37□□□□□ -2.35
UBC7YMR022W RFC4P40339 323 aaKnown RBP0.37□□□□□ -2.35
UBC7YMR022W YDR274CP87283 123 aa0.37□□□□□ -2.35
UBC7YMR022W BNA7Q04066 261 aa0.37□□□□□ -2.35
UBC7YMR022W FUS2Q05670 677 aa0.37□□□□□ -2.35
UBC7YMR022W YHR214C-EQ8TGK0 99 aa0.37□□□□□ -2.35
UBC7YMR022W SEY1Q99287 776 aa0.37□□□□□ -2.35
UBC7YMR022W YLR236CA0A023PZG4 107 aa0.36□□□□□ -2.35
UBC7YMR022W PRP18P33411 251 aaPredicted RBP0.36□□□□□ -2.35
UBC7YMR022W CBT1P36038 271 aaPredicted RBP0.36□□□□□ -2.35
UBC7YMR022W AIM2P39721 246 aa0.36□□□□□ -2.35
UBC7YMR022W ERG28P40030 148 aa0.36□□□□□ -2.35
UBC7YMR022W YNL194CP40169 301 aa0.36□□□□□ -2.35
UBC7YMR022W FIP1P45976 327 aa0.36□□□□□ -2.35
UBC7YMR022W SED1Q01589 338 aa0.36□□□□□ -2.35
UBC7YMR022W YPR174CQ06616 221 aaPredicted RBP0.36□□□□□ -2.35
UBC7YMR022W LCL2Q08045 131 aa0.36□□□□□ -2.35
UBC7YMR022W ABP140Q08641 628 aaKnown RBP0.36□□□□□ -2.35
UBC7YMR022W RAD28Q12021 506 aa0.36□□□□□ -2.35
UBC7YMR022W RUD3Q12234 484 aaKnown RBP0.36□□□□□ -2.35
UBC7YMR022W RPL35AP0CX84 120 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W RPL35BP0CX85 120 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W YHR214C-DP0CX93 97 aa0.35□□□□□ -2.35
UBC7YMR022W RPB3P16370 318 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W MER1P16523 270 aa0.35□□□□□ -2.35
UBC7YMR022W SEN2P16658 377 aa0.35□□□□□ -2.35
UBC7YMR022W ROX3P25046 220 aa0.35□□□□□ -2.35
UBC7YMR022W YCR090CP25654 182 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W SPS18P32572 300 aa0.35□□□□□ -2.35
UBC7YMR022W TCA17P32613 152 aa0.35□□□□□ -2.35
UBC7YMR022W UTP30P36144 274 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W RTC3P38804 111 aaPredicted RBP0.35□□□□□ -2.35
UBC7YMR022W YFL065CP43539 102 aa0.35□□□□□ -2.35
UBC7YMR022W OTU1P43558 301 aa0.35□□□□□ -2.35
UBC7YMR022W IRC18P47056 224 aa0.35□□□□□ -2.35
UBC7YMR022W AIM25P47140 327 aa0.35□□□□□ -2.35
UBC7YMR022W GET1P53192 235 aa0.35□□□□□ -2.35
UBC7YMR022W PDR17P53844 350 aa0.35□□□□□ -2.35
UBC7YMR022W LSM7P53905 115 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W YMR295CQ03559 197 aa0.35□□□□□ -2.35
UBC7YMR022W YDR249CQ03787 373 aa0.35□□□□□ -2.35
UBC7YMR022W HNT1Q04344 158 aaKnown RBP0.35□□□□□ -2.35
UBC7YMR022W PRP11Q07350 266 aaPredicted RBP0.35□□□□□ -2.35
UBC7YMR022W MCP1Q12106 302 aa0.35□□□□□ -2.35
UBC7YMR022W GIS3Q12418 502 aa0.35□□□□□ -2.35
UBC7YMR022W YCL048W-AQ2V2Q2 79 aa0.35□□□□□ -2.35
UBC7YMR022W YKL183C-AQ3E765 70 aa0.35□□□□□ -2.35
UBC7YMR022W YFR032C-BQ8TGU2 87 aa0.35□□□□□ -2.35
UBC7YMR022W JIP3O13555 125 aa0.34□□□□□ -2.36
UBC7YMR022W CDC33P07260 213 aaKnown RBP0.34□□□□□ -2.36
UBC7YMR022W SEC11P15367 167 aa0.34□□□□□ -2.36
UBC7YMR022W YPK2P18961 677 aa0.34□□□□□ -2.36
UBC7YMR022W PAN3P36102 679 aaPredicted RBP0.34□□□□□ -2.36
UBC7YMR022W YCR087C-AP37263 153 aa0.34□□□□□ -2.36
UBC7YMR022W YPL073CP40323 161 aa0.34□□□□□ -2.36
UBC7YMR022W MSS2P40990 351 aa0.34□□□□□ -2.36
UBC7YMR022W GLR1P41921 483 aaKnown RBP0.34□□□□□ -2.36
UBC7YMR022W CCC1P47818 322 aa0.34□□□□□ -2.36
UBC7YMR022W CWC23P52868 283 aaPredicted RBP0.34□□□□□ -2.36
UBC7YMR022W MGA1P53050 456 aa0.34□□□□□ -2.36
UBC7YMR022W YGR050CP53231 118 aa0.34□□□□□ -2.36
UBC7YMR022W YMR226CQ05016 267 aaKnown RBP0.34□□□□□ -2.36
UBC7YMR022W GGA1Q06336 557 aa0.34□□□□□ -2.36
UBC7YMR022W YOL160WQ08321 113 aa0.34□□□□□ -2.36
UBC7YMR022W HTB1P02293 131 aaKnown RBP0.33□□□□□ -2.36
UBC7YMR022W HTB2P02294 131 aa0.33□□□□□ -2.36
UBC7YMR022W SEC4P07560 215 aaKnown RBP0.33□□□□□ -2.36
UBC7YMR022W YSF3P0C074 85 aaPredicted RBP0.33□□□□□ -2.36
UBC7YMR022W RPL27AP0C2H6 136 aaKnown RBP0.33□□□□□ -2.36
UBC7YMR022W ATP15P21306 62 aa0.33□□□□□ -2.36
UBC7YMR022W TAH1P25638 111 aaPredicted RBP0.33□□□□□ -2.36
UBC7YMR022W SUA7P29055 345 aaPredicted RBP0.33□□□□□ -2.36
UBC7YMR022W NTG1P31378 399 aa0.33□□□□□ -2.36
UBC7YMR022W SEC17P32602 292 aa0.33□□□□□ -2.36
UBC7YMR022W IKI1P38874 309 aa0.33□□□□□ -2.36
UBC7YMR022W MTW1P39731 289 aa0.33□□□□□ -2.36
UBC7YMR022W YER134CP40081 178 aa0.33□□□□□ -2.36
UBC7YMR022W HYR1P40581 163 aaKnown RBP0.33□□□□□ -2.36
UBC7YMR022W TMA22P47089 198 aaPredicted RBP0.33□□□□□ -2.36
UBC7YMR022W ARP3P47117 449 aaKnown RBP0.33□□□□□ -2.36
UBC7YMR022W COG5P53951 403 aa0.33□□□□□ -2.36
UBC7YMR022W UPS3Q04006 179 aa0.33□□□□□ -2.36
UBC7YMR022W ARO80Q04052 950 aa0.33□□□□□ -2.36
UBC7YMR022W DYN3Q04949 312 aa0.33□□□□□ -2.36
UBC7YMR022W DGA1Q08650 418 aa0.33□□□□□ -2.36
UBC7YMR022W YDR010CQ12426 110 aa0.33□□□□□ -2.36
UBC7YMR022W ODC2Q99297 307 aa0.33□□□□□ -2.36
UBC7YMR022W FMP49A0A023PZB3 126 aa0.32□□□□□ -2.36
UBC7YMR022W YDR157WA0A023PZE8 133 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms