RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C GEP7P53171 287 aa3.71□□□□□ -1.82
CDC42YLR229C DUG3P53871 357 aa3.71□□□□□ -1.82
CDC42YLR229C PKR1Q03880 122 aaKnown RBP3.71□□□□□ -1.82
CDC42YLR229C YOR186WQ08560 144 aa3.71□□□□□ -1.82
CDC42YLR229C CSM4Q08955 156 aa3.71□□□□□ -1.82
CDC42YLR229C RDL1Q12305 139 aaKnown RBP3.71□□□□□ -1.82
CDC42YLR229C YPR108W-AQ3E7B3 70 aa3.71□□□□□ -1.82
CDC42YLR229C Q0144Q9ZZW2 109 aa3.71□□□□□ -1.82
CDC42YLR229C AQY1P0CD91 305 aa3.7□□□□□ -1.82
CDC42YLR229C HMRA1P0CY11 126 aa3.7□□□□□ -1.82
CDC42YLR229C ELO2P25358 347 aa3.7□□□□□ -1.82
CDC42YLR229C AGA2P32781 87 aa3.7□□□□□ -1.82
CDC42YLR229C FIG1P38224 298 aa3.7□□□□□ -1.82
CDC42YLR229C QDR3P38227 689 aa3.7□□□□□ -1.82
CDC42YLR229C FYV4P38783 130 aaPredicted RBP3.7□□□□□ -1.82
CDC42YLR229C CCS1P40202 249 aaKnown RBP3.7□□□□□ -1.82
CDC42YLR229C ATF1P40353 525 aa3.7□□□□□ -1.82
CDC42YLR229C YIL169CP40442 995 aa3.7□□□□□ -1.82
CDC42YLR229C LOC1P43586 204 aaPredicted RBP3.7□□□□□ -1.82
CDC42YLR229C MRPL19P53875 158 aa3.7□□□□□ -1.82
CDC42YLR229C TSA2Q04120 196 aa3.7□□□□□ -1.82
CDC42YLR229C SHH3Q04487 196 aa3.7□□□□□ -1.82
CDC42YLR229C YMR254CQ04838 102 aa3.7□□□□□ -1.82
CDC42YLR229C LOA1Q06508 300 aa3.7□□□□□ -1.82
CDC42YLR229C RFU1Q08003 200 aa3.7□□□□□ -1.82
CDC42YLR229C HRD1Q08109 551 aa3.7□□□□□ -1.82
CDC42YLR229C YPL162CQ12042 273 aa3.7□□□□□ -1.82
CDC42YLR229C TPT1Q12272 230 aaKnown RBP3.7□□□□□ -1.82
CDC42YLR229C YDL180WQ12301 547 aa3.7□□□□□ -1.82
CDC42YLR229C ADH2P00331 348 aaKnown RBP3.69□□□□□ -1.82
CDC42YLR229C YLL053CP0CD98 152 aa3.69□□□□□ -1.82
CDC42YLR229C MSI1P13712 422 aa3.69□□□□□ -1.82
CDC42YLR229C RPB7P34087 171 aa3.69□□□□□ -1.82
CDC42YLR229C MRPL39P36533 70 aa3.69□□□□□ -1.82
CDC42YLR229C SEC72P39742 193 aaKnown RBP3.69□□□□□ -1.82
CDC42YLR229C HIT1P46973 164 aa3.69□□□□□ -1.82
CDC42YLR229C YPR098CQ06089 161 aa3.69□□□□□ -1.82
CDC42YLR229C YFH1Q07540 174 aa3.69□□□□□ -1.82
CDC42YLR229C CSI2Q08054 341 aa3.69□□□□□ -1.82
CDC42YLR229C YNL162W-AQ3E7A8 72 aa3.69□□□□□ -1.82
CDC42YLR229C SAL1D6W196 494 aa3.68□□□□□ -1.82
CDC42YLR229C PAI3P01094 68 aa3.68□□□□□ -1.82
CDC42YLR229C SEC4P07560 215 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C YER190C-BP0CX94 160 aa3.68□□□□□ -1.82
CDC42YLR229C YEL077W-AP0CX95 160 aa3.68□□□□□ -1.82
CDC42YLR229C YGR296C-BP0CX96 160 aa3.68□□□□□ -1.82
CDC42YLR229C YPL283W-BP0CX97 160 aa3.68□□□□□ -1.82
CDC42YLR229C YPR204C-AP0CX98 160 aa3.68□□□□□ -1.82
CDC42YLR229C FCY2P17064 533 aa3.68□□□□□ -1.82
CDC42YLR229C YCR025CP25352 136 aa3.68□□□□□ -1.82
CDC42YLR229C ARO2P28777 376 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C RAD23P32628 398 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C YBL059WP34224 193 aa3.68□□□□□ -1.82
CDC42YLR229C NTC20P38302 140 aaPredicted RBP3.68□□□□□ -1.82
CDC42YLR229C YHR138CP38841 114 aaPredicted RBP3.68□□□□□ -1.82
CDC42YLR229C TEM1P38987 245 aa3.68□□□□□ -1.82
CDC42YLR229C SEC24P40482 926 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C DFG10P40526 253 aa3.68□□□□□ -1.82
CDC42YLR229C MSL1P40567 111 aaPredicted RBP3.68□□□□□ -1.82
CDC42YLR229C MIC27P50945 234 aa3.68□□□□□ -1.82
CDC42YLR229C RPL21AQ02753 160 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C IZH1Q03419 316 aa3.68□□□□□ -1.82
CDC42YLR229C YDR391CQ04170 232 aa3.68□□□□□ -1.82
CDC42YLR229C YDL157CQ12082 118 aa3.68□□□□□ -1.82
CDC42YLR229C YLR050CQ12155 161 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C RPL21BQ12672 160 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C YLR363W-AQ3E747 85 aa3.68□□□□□ -1.82
CDC42YLR229C HUG1Q6Q5K6 68 aa3.68□□□□□ -1.82
CDC42YLR229C BRR2P32639 2163 aaKnown RBP3.68□□□□□ -1.82
CDC42YLR229C COX2P00410 251 aa3.67□□□□□ -1.82
CDC42YLR229C YPR170W-BP0C5R9 85 aa3.67□□□□□ -1.82
CDC42YLR229C DDI2P0CH63 225 aa3.67□□□□□ -1.82
CDC42YLR229C DDI3P0CH64 225 aa3.67□□□□□ -1.82
CDC42YLR229C SAG1P20840 650 aa3.67□□□□□ -1.82
CDC42YLR229C MRS4P23500 304 aa3.67□□□□□ -1.82
CDC42YLR229C SRP21P32342 167 aa3.67□□□□□ -1.82
CDC42YLR229C MRPS5P33759 307 aa3.67□□□□□ -1.82
CDC42YLR229C MCH2P36032 473 aa3.67□□□□□ -1.82
CDC42YLR229C PRY2P36110 329 aa3.67□□□□□ -1.82
CDC42YLR229C DER1P38307 211 aa3.67□□□□□ -1.82
CDC42YLR229C MTC6P38849 526 aa3.67□□□□□ -1.82
CDC42YLR229C YGR269WP40326 108 aa3.67□□□□□ -1.82
CDC42YLR229C YIL029CP40538 142 aa3.67□□□□□ -1.82
CDC42YLR229C HAC1P41546 238 aa3.67□□□□□ -1.82
CDC42YLR229C BNA1P47096 177 aa3.67□□□□□ -1.82
CDC42YLR229C ARP3P47117 449 aaKnown RBP3.67□□□□□ -1.82
CDC42YLR229C YGL230CP53074 147 aa3.67□□□□□ -1.82
CDC42YLR229C YIP5P53108 310 aa3.67□□□□□ -1.82
CDC42YLR229C YGR050CP53231 118 aa3.67□□□□□ -1.82
CDC42YLR229C BOR1P53838 576 aa3.67□□□□□ -1.82
CDC42YLR229C ADH6Q04894 360 aaKnown RBP3.67□□□□□ -1.82
CDC42YLR229C UPS1Q05776 175 aa3.67□□□□□ -1.82
CDC42YLR229C YOR292CQ08743 309 aa3.67□□□□□ -1.82
CDC42YLR229C SLO1Q3E784 85 aa3.67□□□□□ -1.82
CDC42YLR229C HTL1Q9URQ5 78 aa3.67□□□□□ -1.82
CDC42YLR229C SOD1P00445 154 aaKnown RBP3.66□□□□□ -1.82
CDC42YLR229C MTR2P34232 184 aaKnown RBP3.66□□□□□ -1.82
CDC42YLR229C ICS2P38284 255 aa3.66□□□□□ -1.82
CDC42YLR229C YER079WP40052 210 aaKnown RBP3.66□□□□□ -1.82
CDC42YLR229C YER134CP40081 178 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms