RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C SIN3P22579 1536 aa0.77□□□□□ -2.29
NUP120YKL057C ASF2P32448 525 aaPredicted RBP0.77□□□□□ -2.29
NUP120YKL057C HTD2P38790 280 aaKnown RBP0.77□□□□□ -2.29
NUP120YKL057C SHE2P36068 246 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
NUP120YKL057C HHO1P53551 258 aa0.76□□□□□ -2.29
NUP120YKL057C PGA1P53896 198 aa0.76□□□□□ -2.29
NUP120YKL057C YPR153WQ06537 140 aa0.76□□□□□ -2.29
NUP120YKL057C YKR041WP36134 250 aa0.75□□□□□ -2.29
NUP120YKL057C YLR053CQ12026 108 aa0.75□□□□□ -2.29
NUP120YKL057C RAD51P25454 400 aa0.75□□□□□ -2.29
NUP120YKL057C SKI6P46948 246 aaPredicted RBP0.75□□□□□ -2.29
NUP120YKL057C SPG1P50088 95 aa0.75□□□□□ -2.29
NUP120YKL057C SWR1Q05471 1514 aa0.75□□□□□ -2.29
NUP120YKL057C SHB17P36136 271 aaKnown RBP0.75□□□□□ -2.29
NUP120YKL057C ECM31P38122 312 aa0.75□□□□□ -2.29
NUP120YKL057C RRT1P38192 103 aa0.75□□□□□ -2.29
NUP120YKL057C DER1P38307 211 aa0.75□□□□□ -2.29
NUP120YKL057C MPC3P53311 146 aa0.75□□□□□ -2.29
NUP120YKL057C DML1Q03652 475 aa0.75□□□□□ -2.29
NUP120YKL057C YCL012CQ8J0M4 134 aa0.75□□□□□ -2.29
NUP120YKL057C DAS2Q12084 232 aa0.74□□□□□ -2.29
NUP120YKL057C YGR269WP40326 108 aa0.74□□□□□ -2.29
NUP120YKL057C ERG10P41338 398 aaKnown RBP0.74□□□□□ -2.29
NUP120YKL057C LSM3P57743 89 aaKnown RBP0.74□□□□□ -2.29
NUP120YKL057C SYM1Q06563 197 aa0.74□□□□□ -2.29
NUP120YKL057C CYR1P08678 2026 aaKnown RBP0.74□□□□□ -2.29
NUP120YKL057C RPB7P34087 171 aa0.73□□□□□ -2.29
NUP120YKL057C YNR064CP53750 290 aa0.73□□□□□ -2.29
NUP120YKL057C FMN1Q03778 218 aa0.73□□□□□ -2.29
NUP120YKL057C YGL101WP53144 215 aa0.73□□□□□ -2.29
NUP120YKL057C ELP6Q04868 273 aa0.73□□□□□ -2.29
NUP120YKL057C UPS1Q05776 175 aa0.73□□□□□ -2.29
NUP120YKL057C RAF1Q06891 181 aa0.73□□□□□ -2.29
NUP120YKL057C PET20Q99373 253 aa0.73□□□□□ -2.29
NUP120YKL057C DNF1P32660 1571 aa0.73□□□□□ -2.29
NUP120YKL057C FIG1P38224 298 aa0.73□□□□□ -2.29
NUP120YKL057C NMA1Q06178 401 aaKnown RBP0.72□□□□□ -2.29
NUP120YKL057C VAR1P02381 398 aa0.72□□□□□ -2.29
NUP120YKL057C RPS25BP0C0T4 108 aaKnown RBP0.72□□□□□ -2.29
NUP120YKL057C IDP1P21954 428 aaKnown RBP0.72□□□□□ -2.29
NUP120YKL057C CCS1P40202 249 aaKnown RBP0.72□□□□□ -2.29
NUP120YKL057C THI74Q04083 370 aa0.72□□□□□ -2.29
NUP120YKL057C RPS25AQ3E792 108 aaPredicted RBP0.72□□□□□ -2.29
NUP120YKL057C YEL014CP39999 101 aa0.71□□□□□ -2.3
NUP120YKL057C YRF1-3P0CX14 1859 aa0.71□□□□□ -2.3
NUP120YKL057C YRF1-7P0CX15 1859 aa0.71□□□□□ -2.3
NUP120YKL057C UBC8P28263 218 aa0.71□□□□□ -2.3
NUP120YKL057C ATP5P09457 212 aa0.71□□□□□ -2.3
NUP120YKL057C YBL010CP32788 280 aa0.71□□□□□ -2.3
NUP120YKL057C YEL028WP39989 153 aa0.71□□□□□ -2.3
NUP120YKL057C MPC1P53157 130 aaKnown RBP0.71□□□□□ -2.3
NUP120YKL057C SED1Q01589 338 aa0.71□□□□□ -2.3
NUP120YKL057C HAP2P06774 265 aa0.7□□□□□ -2.3
NUP120YKL057C MDS3P53094 1487 aa0.7□□□□□ -2.3
NUP120YKL057C RPL30P14120 105 aaKnown RBP0.7□□□□□ -2.3
NUP120YKL057C ANB1P19211 157 aa0.7□□□□□ -2.3
NUP120YKL057C AME1P38313 324 aa0.7□□□□□ -2.3
NUP120YKL057C UBC12P52491 188 aa0.7□□□□□ -2.3
NUP120YKL057C SPS2P08459 502 aa0.69□□□□□ -2.3
NUP120YKL057C SUI1P32911 108 aaKnown RBP0.69□□□□□ -2.3
NUP120YKL057C CCC1P47818 322 aa0.69□□□□□ -2.3
NUP120YKL057C EST3Q03096 181 aa0.69□□□□□ -2.3
NUP120YKL057C IRC21Q04772 201 aa0.69□□□□□ -2.3
NUP120YKL057C HSP150P32478 413 aa0.69□□□□□ -2.3
NUP120YKL057C NSE4P43124 402 aa0.69□□□□□ -2.3
NUP120YKL057C YEL073CP39974 107 aa0.69□□□□□ -2.3
NUP120YKL057C HPA3P39979 161 aa0.69□□□□□ -2.3
NUP120YKL057C SOL1P50278 321 aa0.69□□□□□ -2.3
NUP120YKL057C NQM1P53228 333 aaPredicted RBP0.69□□□□□ -2.3
NUP120YKL057C APS3P47064 194 aa0.68□□□□□ -2.3
NUP120YKL057C TTI2P47168 421 aa0.68□□□□□ -2.3
NUP120YKL057C NAT3Q06504 195 aa0.68□□□□□ -2.3
NUP120YKL057C PET54P10834 293 aa0.68□□□□□ -2.3
NUP120YKL057C UPS2P35200 230 aa0.68□□□□□ -2.3
NUP120YKL057C FLX1P40464 311 aa0.68□□□□□ -2.3
NUP120YKL057C AVO2Q04749 426 aa0.68□□□□□ -2.3
NUP120YKL057C YPD1Q07688 167 aa0.68□□□□□ -2.3
NUP120YKL057C KOG1P38873 1557 aa0.67□□□□□ -2.3
NUP120YKL057C PFY1P07274 126 aa0.67□□□□□ -2.3
NUP120YKL057C ATP20Q12233 115 aa0.67□□□□□ -2.3
NUP120YKL057C DDP1Q99321 188 aaKnown RBP0.67□□□□□ -2.3
NUP120YKL057C RPL35AP0CX84 120 aaKnown RBP0.67□□□□□ -2.3
NUP120YKL057C RPL35BP0CX85 120 aaKnown RBP0.67□□□□□ -2.3
NUP120YKL057C SRP21P32342 167 aa0.67□□□□□ -2.3
NUP120YKL057C MRPL15P36523 253 aa0.67□□□□□ -2.3
NUP120YKL057C YHR140WP38842 239 aa0.67□□□□□ -2.3
NUP120YKL057C GPI2P46961 280 aa0.67□□□□□ -2.3
NUP120YKL057C MYO2P19524 1574 aaKnown RBP0.67□□□□□ -2.3
NUP120YKL057C RME1P32338 300 aaKnown RBP0.67□□□□□ -2.3
NUP120YKL057C YMR315WQ04869 349 aaKnown RBP0.67□□□□□ -2.3
NUP120YKL057C NTE1Q04958 1679 aa0.66□□□□□ -2.3
NUP120YKL057C RCF2P53721 224 aa0.66□□□□□ -2.3
NUP120YKL057C YPR202WQ08993 238 aa0.66□□□□□ -2.3
NUP120YKL057C KIN28P06242 306 aa0.66□□□□□ -2.3
NUP120YKL057C DCV1P43595 202 aa0.66□□□□□ -2.3
NUP120YKL057C AIM36Q03798 255 aa0.66□□□□□ -2.3
NUP120YKL057C COA3Q3E7B2 85 aa0.66□□□□□ -2.3
NUP120YKL057C REV3P14284 1504 aa0.65□□□□□ -2.3
NUP120YKL057C NHP6AP11632 93 aaKnown RBP0.65□□□□□ -2.31
NUP120YKL057C RNH202Q05635 350 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms