RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN1	YHR027C	CDC26	P14724	124 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	MDH2	P22133	377 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	VMA11	P32842	164 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	VBA2	P38358	474 aa	Known RBP	2.68	□□□□□ -1.98
RPN1	YHR027C	APQ12	P40532	138 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	YDL218W	Q07629	317 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	TAD3	Q9URQ3	322 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	CDC21	P06785	304 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	RPL12A	P0CX53	165 aa	Known RBP	2.68	□□□□□ -1.98
RPN1	YHR027C	RPL12B	P0CX54	165 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	RNQ1	P25367	405 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	MTC7	P32633	139 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	KTI12	P34253	313 aa	Known RBP	2.68	□□□□□ -1.98
RPN1	YHR027C	MID2	P36027	376 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	AUR1	P36107	401 aa	Predicted RBP	2.68	□□□□□ -1.98
RPN1	YHR027C	YBR184W	P38299	523 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	SNF11	P38956	169 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	YNL195C	P40168	261 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	YIL059C	P40520	121 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	BUD8	P41698	603 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	CWP2	P43497	92 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	NCE103	P53615	221 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	EFM6	P53970	246 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	VPS71	Q03433	280 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	LPP1	Q04396	274 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	SWT1	Q12104	458 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	YDR119W-A	Q2V2P9	66 aa		2.68	□□□□□ -1.98
RPN1	YHR027C	VPS63	O13549	108 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	HEM4	P06174	275 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	BET2	P20133	325 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	YSR3	P23501	404 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	PHO88	P38264	188 aa	Predicted RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	ANS1	P38832	159 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	ELO1	P39540	310 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	YJL193W	P39542	402 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	YJR096W	P47137	282 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	BXI1	P48558	297 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	BRP1	P53194	125 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	OGG1	P53397	376 aa	Predicted RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	YMR178W	Q03219	274 aa	Known RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	YMR310C	Q04867	317 aa	Predicted RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	YOR105W	Q08504	108 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	UBA3	Q99344	299 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	GAL2	P13181	574 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	PAM17	P36147	197 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	YNL194C	P40169	301 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	CUP9	P41817	306 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	LCB3	P47013	409 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	ARP3	P47117	449 aa	Known RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	WSC2	P53832	503 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	PIR3	Q03180	325 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	MIX17	Q03667	156 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	RAV2	Q03956	351 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	HRT1	Q08273	121 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	SOD1	P00445	154 aa	Known RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	RAD6	P06104	172 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	RPS22A	P0C0W1	130 aa	Known RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	SPO13	P23624	291 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	RPA12	P32529	125 aa	Known RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	SHB17	P36136	271 aa	Known RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	IST3	P40565	148 aa	Predicted RBP	2.67	□□□□□ -1.98
RPN1	YHR027C	EGT2	P42835	1041 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	SBH1	P52870	82 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	UPS1	Q05776	175 aa		2.67	□□□□□ -1.98
RPN1	YHR027C	YCR085W	P25650	117 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	ECM15	P35195	104 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	YEL073C	P39974	107 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	YGR039W	P53225	103 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	ABF2	Q02486	183 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	SPG3	Q04398	127 aa	Predicted RBP	2.66	□□□□□ -1.98
RPN1	YHR027C	AYT1	Q12226	474 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	YOR029W	Q12243	111 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	YAL063C-A	Q3E791	96 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	ENV10	Q99382	181 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	FLO9	P39712	1322 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	PHO85	P17157	305 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	SPC29	P33419	253 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	YNL200C	P40165	246 aa	Known RBP	2.66	□□□□□ -1.98
RPN1	YHR027C	CRH1	P53301	507 aa		2.66	□□□□□ -1.98
RPN1	YHR027C	YMR090W	Q04304	227 aa	Known RBP	2.66	□□□□□ -1.98
RPN1	YHR027C	MRPL51	Q06090	140 aa	Predicted RBP	2.66	□□□□□ -1.98
RPN1	YHR027C	CCS1	P40202	249 aa	Known RBP	2.65	□□□□□ -1.98
RPN1	YHR027C	YFR057W	P43625	151 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	GEP7	P53171	287 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	CDH1	P53197	566 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	YNR064C	P53750	290 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	AIM11	P87275	137 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	YFH1	Q07540	174 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	FIT3	Q08907	204 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	YFL041W-A	Q3E817	63 aa		2.65	□□□□□ -1.98
RPN1	YHR027C	ECM12	O13529	151 aa		2.65	□□□□□ -1.99
RPN1	YHR027C	YPT10	P38146	199 aa		2.65	□□□□□ -1.99
RPN1	YHR027C	YFR020W	P43600	232 aa		2.65	□□□□□ -1.99
RPN1	YHR027C	YFR045W	P43617	309 aa		2.65	□□□□□ -1.99
RPN1	YHR027C	MSO1	P53604	210 aa	Known RBP	2.65	□□□□□ -1.99
RPN1	YHR027C	AQR1	P53943	586 aa		2.65	□□□□□ -1.99
RPN1	YHR027C	YBL059W	P34224	193 aa		2.64	□□□□□ -1.99
RPN1	YHR027C	CTK2	P46962	323 aa		2.64	□□□□□ -1.99
RPN1	YHR027C	YGL118C	P53132	145 aa		2.64	□□□□□ -1.99
RPN1	YHR027C	RHO5	P53879	331 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms